Gene Information

Name : BC1001_1005 (BC1001_1005)
Accession : YP_004227511.1
Strain :
Genome accession: NC_015136
Putative virulence/resistance : Unknown
Product : transposase IS3/IS911 family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 1126027 - 1126422 bp
Length : 396 bp
Strand : +
Note : PFAM: transposase IS3/IS911 family protein; KEGG: bgl:bglu_1p0420 transposase

DNA sequence :
ATGTTTAAGCCCAGTCACAACGTGGAACCCGTCGAAGTTCTAACCCAGCCGGAGCAGCGCCGCCGGCGCTCTGTCGAAGA
AAAGCTCGCAATAGTGCGCGAGACGTTTGAGCCTGGTGCCACTGTTTCGGGCGTTGCGCGTCGCCATCAGGTGAACGCCA
ACCAGGTCTTTGGCTGGCGCAAGCTCTATCAGGATGGAAGCCTGTCGGCAGTCAGTGCCGGCGAACAGGTGGTACCGGCA
TCGGACCTGGCTGAAGCGATGAAGCAGATTCGCGAACTCCAGCGATTGCTGGGAAAGAAAACAATGGAGGTGGAAATCCT
CCGCGAAGCAGTGGAGTATGGTCGAGCAAAAAAATTGATTGCGCGCTCACCATTGCTGCCGGGGGACGACCGTTGA

Protein sequence :
MFKPSHNVEPVEVLTQPEQRRRRSVEEKLAIVRETFEPGATVSGVARRHQVNANQVFGWRKLYQDGSLSAVSAGEQVVPA
SDLAEAMKQIRELQRLLGKKTMEVEILREAVEYGRAKKLIARSPLLPGDDR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpG AAD44740.1 TnpG Not tested SHI-2 Protein 3e-38 72
ECO26_5247 YP_003232129.1 insertion sequence 2 OrfA protein Not tested LEE Protein 5e-38 72
unnamed AAL57520.1 IS2 transposase Not tested LEE Protein 3e-38 72
S3188 NP_838471.2 insertion sequence 2 OrfA protein Not tested SHI-1 Protein 5e-38 72
st02 CAC81840.1 ST02 protein Not tested LEE II Protein 3e-38 72
S4060 NP_839229.2 insertion sequence 2 OrfA protein Not tested SHI-2 Protein 5e-38 72
S4049 NP_839217.2 insertion sequence 2 OrfA protein Not tested SHI-2 Protein 1e-37 71
SF2984 NP_708758.3 IS2 ORF1 Not tested SHI-1 Protein 6e-39 68
aec50 AAW51733.1 Aec50 Not tested AGI-3 Protein 3e-38 67
SF3709 NP_709448.3 IS2 ORF1 Not tested SHI-2 Protein 2e-38 67
SF3722 NP_709461.3 IS2 ORF1 Not tested SHI-2 Protein 2e-38 67
c5196 NP_757044.1 transposase insC Not tested PAI II CFT073 Protein 4e-26 66
insC AAZ04431.1 IS2 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 3e-26 66
insC YP_854262.1 IS2 transposase Not tested PAI I APEC-O1 Protein 4e-26 66
unnamed AAL67376.1 insertion sequence protein Not tested PAI II CFT073 Protein 2e-27 64
insC YP_002414034.1 IS2 insertion element repressor InsA; KpLE2 phage-like element Not tested Not named Protein 3e-27 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BC1001_1005 YP_004227511.1 transposase IS3/IS911 family protein VFG0648 Protein 2e-39 68
BC1001_1005 YP_004227511.1 transposase IS3/IS911 family protein VFG0622 Protein 5e-39 67
BC1001_1005 YP_004227511.1 transposase IS3/IS911 family protein VFG0609 Protein 5e-39 67
BC1001_1005 YP_004227511.1 transposase IS3/IS911 family protein VFG1733 Protein 7e-28 59