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Name : BLLJ_1440 (BLLJ_1440) Accession : YP_004221199.1 Strain : Bifidobacterium longum JCM 1217 Genome accession: NC_015067 Putative virulence/resistance : Virulence Product : Clp protease Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1710624 - 1713233 bp Length : 2610 bp Strand : - Note : - DNA sequence : ATGTTCGAACGGTTTACCGACCGTGCACGGCGCGTGATCGTGTTGGCGCAGGAAGAGGCGAGGGCCCTTCAGCACAACTA CATCGGCACCGAACACCTGCTGCTCGGCCTGATCCGCGAAGGTGAGGGTGTAGCCGCCAAGGCACTCGCCTCGAAGGGCG TGGAGCTGGATGCCACCCGCAAGCAGGTTGAAGAAATGATCGGCAAGGGCAACGCGGCTCCGAACGGGCACATCCCCTTT ACTCCGCACGCCAAGCAGGTGTTGGAGTTTTCGCTGCGTGAAGCCCTGCAGCTGGGCCACAGCTACATCGGCACCGAGCA CATCCTGCTCGGCCTGATTCGCGAAGGCGAAGGCGTGGGCACCCAGGTGCTCATCAAGATGGACGTCGATCTGGGCGAGT TGCGTAGCGCGACCATCGATATGATTCGCGGCAACTCCGGCACCGGCACCGGTGACGGCAAGGGCGACTTGGCCAACGCC GGCGGCGTGACGGACAAGCAGAACAAGTCCGGTTCCGCCATCCTCGATCAGTTCGGCCGCAACCTGACCGCCGAAGCCGC TGAAGGCAAGCTGGACCCGGTCATCGGCCGTACCAACGAGATTGAGCGTGTTATGGTCGTGCTCTCCCGCCGCACCAAGA ACAACCCGGTGCTGATCGGCGAGCCCGGCGTGGGCAAGACCGCTGTGGTCGAAGGCTTGGCCCAGAAGATCCAAGCCGGC GACGTGCCGGAAACCCTGAAGGGCAAGCAGGTCTACTCGCTGGACCTCGGTTCCATGGTGGCCGGCTCCCGCTACCGTGG TGATTTCGAGGAGCGCCTGAAGAAGGTGCTGAAGGAAATCAAGACCCGTGGTGATATCGTGCTGTTCATCGACGAGATCC ACACCATCGTGGGCGCCGGCTCGGCTGACGGCGCGCTGGGTGCCTCCGACATGTTGAAGCCGATGCTGGCCCGTGGCGAG CTCCAGACCATTGGTGCCACCACCACCGACGAGTACCGCAAGTACATCGAGAAGGACGCGGCTCTGGAACGCCGTTTCCA GCCGATTCAGGTGCACGAGCCGACCATCGCCGAGACCATCGAGATCCTGAAGGGCCTGCGTTCCCGTTACGAGAACCACC ACCACGTGACCATCACCGATGGCGCGCTGCAGTCCGCCGCAGAGCTGTCCAGCCGGTACATCCAGGACCGTAATCTGCCT GACAAGGCCATCGACCTGATCGATGAGGCCGGTGCACGCCTGCGCATCAAGCGCCTGACCGCCCCGCCTGAGCTCAAGGA ACTCGACGAGAAGATCGCCAAGATCGCCGCCGACAAGGACGAGGCCATCAAGGGCCAGGACTTCGAGAAGGCCGCCGAAC TGCGCGACAAGCAGGAGAAGCTGGAAGCCGATCGCAAGCAGAAGGAAGACTCCTGGCGCGAAGGCGAGTCCGACGTCAAG ATGGTCGTGGACGAGGACGTGATCGCCGAGGTCATCAGCTCCACCACCGGTATCCCGGTGTTCAAGCTGACTCAGGCCGA GTCCAAGAAACTGCTCAACATGGAAGCCGAACTGCACAAGCGCATCATCGGCCAGGACGAGGCGGTTTCCGCCCTGTCCC GCTCTATCCGCCGTACTCGCGTGGGTCTGAAGGACCCGAAGCGCCCGTCCGGCTCGTTCATCTTCGCCGGCCCCACCGGC GTCGGCAAGACCGAGCTGGCCAAGACGCTCGCCGAATTCCTGTTCGACGATGAGGACGCGCTGATTCGCGTGGATATGTC CGAGTTCTCCGAGAAGTACGCGGCTTCGCGACTCTTCGGTGCGCCTCCGGGATACGTCGGCTACGAGGAAGGCGGCGAGC TCACCGAAAAGGTGCGCCGCAAGCCGTTCTCCGTGGTGCTGTTCGACGAGATCGAAAAGGCTCATCCGGACATCTTCAAC ACGTTGCTGCAGGTGCTCGATGACGGCCACCTGACCGACGGTCAGGGCCGCAAGGTGGACTTTAAGAACACCATCATCAT CCTGACCACCAACCTCGGTACGCGAGACATCGCCAAGGCCGCCAACACGGGCTTCAACCTAGGTGCCAACAACGAGTCCA GCTACCAGCGCATGAAGGACCAGGTCAGCTCCGAATTGAAGCAGCAGTTCCGCCCGGAGTTCCTGAACCGTCTGGACGAC ATCATCGTCTTCAAGCAGCTCACCGAGCCGCAGGTGCGCCAGATCGTGGATCTGGACGTCAAGCAGCTCAACGACCGCCT GTTCGACCGTCATATGTCGCTCGAACTCACCGACGCCGCCAAGGACCTGCTCGCGCAGAAGGGCTTCGACCCGCTGCTCG GTGCCCGTCCGCTGCGCCGCGTGATTCAGCGCGACATCGAGGACGCCATCTCCGAGAAGATCCTGATGGGCGATCTCGAA GACGGTCAGCGCGTGATTGTGGATGCGGAAGGCGAGGGTATCCTCGGCGAATTCACCTTCAAGGGTGAGGAGTTCGAGGA GCCGGCCGCCGCCGATAAGCCCGCCGAAGACGGTGCCGCCACTGATGGCGAGACTCCAGCCGACGCCACTCCGGCCACTG AGCCGGCCGAATCCGCTCCCGCCGATTCCGGTGACGCTCCGCAGGAGTAG Protein sequence : MFERFTDRARRVIVLAQEEARALQHNYIGTEHLLLGLIREGEGVAAKALASKGVELDATRKQVEEMIGKGNAAPNGHIPF TPHAKQVLEFSLREALQLGHSYIGTEHILLGLIREGEGVGTQVLIKMDVDLGELRSATIDMIRGNSGTGTGDGKGDLANA GGVTDKQNKSGSAILDQFGRNLTAEAAEGKLDPVIGRTNEIERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLAQKIQAG DVPETLKGKQVYSLDLGSMVAGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIHTIVGAGSADGALGASDMLKPMLARGE LQTIGATTTDEYRKYIEKDAALERRFQPIQVHEPTIAETIEILKGLRSRYENHHHVTITDGALQSAAELSSRYIQDRNLP DKAIDLIDEAGARLRIKRLTAPPELKELDEKIAKIAADKDEAIKGQDFEKAAELRDKQEKLEADRKQKEDSWREGESDVK MVVDEDVIAEVISSTTGIPVFKLTQAESKKLLNMEAELHKRIIGQDEAVSALSRSIRRTRVGLKDPKRPSGSFIFAGPTG VGKTELAKTLAEFLFDDEDALIRVDMSEFSEKYAASRLFGAPPGYVGYEEGGELTEKVRRKPFSVVLFDEIEKAHPDIFN TLLQVLDDGHLTDGQGRKVDFKNTIIILTTNLGTRDIAKAANTGFNLGANNESSYQRMKDQVSSELKQQFRPEFLNRLDD IIVFKQLTEPQVRQIVDLDVKQLNDRLFDRHMSLELTDAAKDLLAQKGFDPLLGARPLRRVIQRDIEDAISEKILMGDLE DGQRVIVDAEGEGILGEFTFKGEEFEEPAAADKPAEDGAATDGETPADATPATEPAESAPADSGDAPQE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 67 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| BLLJ_1440 | YP_004221199.1 | Clp protease | VFG0079 | Protein | 0.0 | 57 |
| BLLJ_1440 | YP_004221199.1 | Clp protease | VFG0080 | Protein | 3e-135 | 51 |
