Gene Information

Name : AciX9_3313 (AciX9_3313)
Accession : YP_004219104.1
Strain : Granulicella tundricola MP5ACTX9
Genome accession: NC_015064
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3810605 - 3811306 bp
Length : 702 bp
Strand : -
Note : KEGG: glo:Glov_1807 transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver

DNA sequence : 
ATGCCGGGATCTCAGAGCGAGCGCATCCTCGTCGTCGAAGACGAACGCAAGATCTCTGAGGCGGTCACGGCAGGTCTGAA
GAGCGCCGGCTATGAGGTTCTTGCTGCTCGAACGGTGGAAGACGGCTTGTTCCTTCTTCATAGTCAGCATCCGGACATGA
TCGTGCTCGACTTGGGGCTGCCGGGAATGTCTGGAATGGAGATGCTGCGGCAGTTGCGCGCGATGGGCATCATGATTCCC
GTCCTCATCCTGACCTCAAATAATTCGCTCGATGATCGGGTGGCCGCCTTGGATTTGGGTGCGGATGATTTTCTGCTGAA
GCCGTTTTCGACCGCTGAGTTGAACGCGCGGATGAGGGCAATTTCAAGACGTGGCAGACCAACCCAGGTGGCGCAGCTTT
CCGTCGCGGATCTAGAGATCAATCTTGAAACGAGGACCGTGGTGCGTGGTGGCATGCAGCTTGAACTGACGGCGCGGGAG
TTCGATCTCATCGTTTACTTTGTGGGGAATCGCGGCCGCACGGTGTCTCGCGAGATGCTTGCACGGGATGTGTGGCATGA
GACGTCCCGCTTTACGCCGATCGATAACGTGATCGACGTGCAGATCACGCGGCTTCGCCGGAAGCTGGATGATCCATTTC
CGCAGAAGCTGCTTCGCACCGTTCGTGGCGTGGGTTTCATCCTTGGCGAGGCGGACGCATGA

Protein sequence : 
MPGSQSERILVVEDERKISEAVTAGLKSAGYEVLAARTVEDGLFLLHSQHPDMIVLDLGLPGMSGMEMLRQLRAMGIMIP
VLILTSNNSLDDRVAALDLGADDFLLKPFSTAELNARMRAISRRGRPTQVAQLSVADLEINLETRTVVRGGMQLELTARE
FDLIVYFVGNRGRTVSREMLARDVWHETSRFTPIDNVIDVQITRLRRKLDDPFPQKLLRTVRGVGFILGEADA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 8e-30 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AciX9_3313 YP_004219104.1 transcriptional regulator BAC0125 Protein 4e-33 43
AciX9_3313 YP_004219104.1 transcriptional regulator BAC0197 Protein 8e-29 43
AciX9_3313 YP_004219104.1 transcriptional regulator BAC0083 Protein 7e-34 42
AciX9_3313 YP_004219104.1 transcriptional regulator BAC0347 Protein 3e-31 42
AciX9_3313 YP_004219104.1 transcriptional regulator BAC0111 Protein 7e-35 41
AciX9_3313 YP_004219104.1 transcriptional regulator BAC0638 Protein 4e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AciX9_3313 YP_004219104.1 transcriptional regulator VFG0596 Protein 3e-30 42
AciX9_3313 YP_004219104.1 transcriptional regulator VFG1389 Protein 8e-26 41