Gene Information

Name : AciX9_2675 (AciX9_2675)
Accession : YP_004218479.1
Strain : Granulicella tundricola MP5ACTX9
Genome accession: NC_015064
Putative virulence/resistance : Resistance
Product : major facilitator superfamily protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG2814
EC number : -
Position : 3115601 - 3116851 bp
Length : 1251 bp
Strand : -
Note : PFAM: major facilitator superfamily MFS_1; KEGG: aby:ABAYE3597 tetracycline resistance protein, class A (TetA(A))

DNA sequence :
ATGATGCGCTCCAACTCACGCTCTACGACCCTTATCTTTCTTATCGTGTTTCTGGATGCCATGGGCATCGGGATCGTCTT
TCCGGTGCTGCCGGGACTGCTGCGCTCTTTGCTGCATGGACAAGGGCTGCATGGGCCGGGCGACGTGGTGCGGCAGTATG
GCTATCTGCTGGCGGCTTATGCGGCGACGATGCTGCTGGCGAGCCCGGTGCTCGGGGCGTTGAGCGACAGGTTTGGGCGT
CGGCCGATTCTGCTGCTGTCGCTGATGGGGACGGCGGTGGATGACCTGGTGATGGCGCTCTCGCCTACGGTGTGGGTGTT
GTACGTGGGGCGGGCGGTGGCGGGGCTGACTGGGGCAAATATGACGGTCGCGAATGCCTATCTGGCGGATATCAACTCTG
CCGAGACGCGGGCGGCGGCGTTCGGGCGGATGAATGCGTTCTTTGGGGTGGGGTTTATTGCGGGACCGGTGCTGGGTGGG
TTGTGCGGGACGTACTCGCTGAGGGCTCCTTTTTATGTTGCGGCGGGGTTGAATCTGATTGGGTTTTTGGTGTGTGCGCT
GGTGCTGCCGGAGTCGCTTGTGGCGCGGGCGGCGGTGCGGCCGCGGATTACCCTTGCGCAGTTGAATCCGTTTGCTGCCA
TGCGGGCGATCAGCGGGCTGCATGGCGTGGGCCGGCTGCTGTATATGTTCTGCACGATCGACCTGGTGGGGCAGGTGCCG
GCGGTTTTGTGGGTGCTGTATACGACGGGGCGCTTTCAGTGGACACCTACGGTGGTGGGGATCTCGTTTGCGTACTTTGG
GCTGTTTCATGCACTGTGCCAGGCATTTCTGCCGGAGCGGTTGCAGAAGCGATGGGGTGAGCGGGGGACACTGATGATCG
GGATGACGGCTGACAGTGTGGGGATGGTGCTGTTCTCGCTGGCGCGGAGTACGGCTGCGGTGTTCGGGATGATTCCGCTG
CTTTGTCTGGGTGGAGTTTCGCTGCCGGCGTTGCAGTCGTTGCTTTCAAACAGCGTAGGGGATGAGCGGCAAGGCGAGAT
GCAGGGCGTGCTGACAAGCTTCAACGGGCTGATTGCGGTGACGGGGCCGGTGCTGGCCTCGGGTGTTTATGGCTTGCTGC
GGGAGCGGGTGCCTTCGTATCCGGGAGCGGTGTGGCTGGTGCCGGTTATGCTGTACTTGCCTTGTTTCCTGATGGTCGCG
GTTGGCGGCAAGCTGGGGCGCAGGGCATCTGTAACGACAGACGGGGAGTGA

Protein sequence :
MMRSNSRSTTLIFLIVFLDAMGIGIVFPVLPGLLRSLLHGQGLHGPGDVVRQYGYLLAAYAATMLLASPVLGALSDRFGR
RPILLLSLMGTAVDDLVMALSPTVWVLYVGRAVAGLTGANMTVANAYLADINSAETRAAAFGRMNAFFGVGFIAGPVLGG
LCGTYSLRAPFYVAAGLNLIGFLVCALVLPESLVARAAVRPRITLAQLNPFAAMRAISGLHGVGRLLYMFCTIDLVGQVP
AVLWVLYTTGRFQWTPTVVGISFAYFGLFHALCQAFLPERLQKRWGERGTLMIGMTADSVGMVLFSLARSTAAVFGMIPL
LCLGGVSLPALQSLLSNSVGDERQGEMQGVLTSFNGLIAVTGPVLASGVYGLLRERVPSYPGAVWLVPVMLYLPCFLMVA
VGGKLGRRASVTTDGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tetA(A) ACK44537.1 TetA(A) Not tested SGI1 Protein 2e-66 47
tetA(A) AGK07027.1 TetA(A) Not tested SGI1 Protein 2e-66 47
tetA YP_006098396.1 tetracycline resistance protein Not tested Tn2411 Protein 3e-66 47
tetA(A) AGK07085.1 TetA(A) Not tested SGI1 Protein 2e-66 47
tetA(A) ACN81011.1 TetA(A) Not tested AbaR5 Protein 2e-66 47
tetA CAJ77066.1 Tetracycline resistance protein Not tested AbaR1 Protein 1e-66 47
tetA CAJ77034.1 Tetracycline resistance protein Not tested AbaR1 Protein 1e-62 45
tet(G) AAK02051.1 tetracycline resistance protein Not tested SGI1 Protein 2e-60 44
tetA(G) ABZ01843.1 TetA(G) Not tested SGI2 Protein 2e-60 44
tetA(G) AGK06974.1 TetA(G) Not tested SGI1 Protein 2e-60 44
tetA(G) AGK07104.1 TetA(G) Not tested SGI1 Protein 2e-60 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AciX9_2675 YP_004218479.1 major facilitator superfamily protein AY264780.2.gene3.p01 Protein 2e-65 48
AciX9_2675 YP_004218479.1 major facilitator superfamily protein X75761.gene.p01 Protein 3e-66 48
AciX9_2675 YP_004218479.1 major facilitator superfamily protein NC_011586.7045189.p0 Protein 4e-63 47
AciX9_2675 YP_004218479.1 major facilitator superfamily protein AF534183.gene.p01 Protein 9e-67 47
AciX9_2675 YP_004218479.1 major facilitator superfamily protein NC_010410.6002597.p0 Protein 8e-67 47
AciX9_2675 YP_004218479.1 major facilitator superfamily protein CP001485.1.gene2821. Protein 8e-67 47
AciX9_2675 YP_004218479.1 major facilitator superfamily protein Y19114.gene.p01 Protein 2e-66 46
AciX9_2675 YP_004218479.1 major facilitator superfamily protein NC_010410.6002612.p0 Protein 8e-63 45
AciX9_2675 YP_004218479.1 major facilitator superfamily protein AF133140.gene.p01 Protein 8e-63 45
AciX9_2675 YP_004218479.1 major facilitator superfamily protein AF133139.gene.p01 Protein 3e-61 45
AciX9_2675 YP_004218479.1 major facilitator superfamily protein AF090987.gene.p01 Protein 5e-56 45
AciX9_2675 YP_004218479.1 major facilitator superfamily protein AY743590.gene.p01 Protein 2e-64 44
AciX9_2675 YP_004218479.1 major facilitator superfamily protein Y19116.gene.p01 Protein 9e-51 44
AciX9_2675 YP_004218479.1 major facilitator superfamily protein L06940.gene.p01 Protein 8e-53 43