Gene Information

Name : AciX9_0220 (AciX9_0220)
Accession : YP_004216074.1
Strain : Granulicella tundricola MP5ACTX9
Genome accession: NC_015064
Putative virulence/resistance : Virulence
Product : NAD-dependent epimerase/dehydratase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0451
EC number : -
Position : 283592 - 284566 bp
Length : 975 bp
Strand : +
Note : PFAM: NAD-dependent epimerase/dehydratase; KEGG: aca:ACP_1490 exopolysaccharide biosynthesis protein

DNA sequence : 
TTGGCAAGCTATCTCATCACCGGCATCGCAGGCTTCATCGGCTCTCACTTGGCCCACGCGCTAGTGCGTCGCGGCGATTC
CGTCCGTGGTCTCGATAATCTCTCCACCGGTTCTCTCGCCAACCTGTCGGACATCATCCCCGGAATTGATTTCCGGCAAG
CCGACCTTCGCGATGCCGCAGCAGTGGAAGAAGCGTGTCAGGGGATCGACTACATCCTTCACCAGGGAGCGCTCCCCAGC
GTCCCCCGCTCAGTGAAGGACCCACGGACCAGCCATGAAAGCAACATTGACGGAACATTCAACCTCCTTGAAGGAGCCCG
CGCCGCCGGCGTCAAGCGCGTCGTCTATGCCGCCTCTTCCTCTGCGTATGGAAATCAGCCCGGCTTCCCTCGCCGTGAGA
CGATGGTGCCGCAGCCCATCGCACCTTATCCCGTCCAGAAGCTGACCGGCGAGCTCTACATGCGTTCCTACTGGCAGGTC
TACGGCCTTGAAACCGTCTGTCTCCGATACTTCAATATCTTTGGCCCGGGCCAGACGCCTGACTCCCCATACTCCGGCGT
GATGGCACGTTTCATCCTCCAGATGATGCGTGGTGAGCAGCCCGTCATCAATGGCGATGGAGAACAAGGTCGCGACTTCA
CATACGTCGATAACGCCGTTGAAGCAAATCTGAAAGCCTTGACCGCACCGGCAGAGAAGGTAGCCGGGCGGGTCTTCAAC
GTCGCGACCGGTGAGCGCCATACGCTTAATGAGACATACAGCATCCTTGCCGGTCTTCTCGGTCATGAAGCGCCTCCCCA
GTACGGCCCGGAACGCTCTGGCGACATCCGCGACTCGCTTGCGGATATCTCAGCCGCGCAAGAGGCCTTCGCCTACGCTC
CGCAGGTCGGCTTTGAAGAAGGTCTTCGGCGCACCGTTGCATGGTACGTCGCTCAATATGGAGCGTCCCTGAAAATGGAA
TCAGTCTCCTCTTGA

Protein sequence : 
MASYLITGIAGFIGSHLAHALVRRGDSVRGLDNLSTGSLANLSDIIPGIDFRQADLRDAAAVEEACQGIDYILHQGALPS
VPRSVKDPRTSHESNIDGTFNLLEGARAAGVKRVVYAASSSAYGNQPGFPRRETMVPQPIAPYPVQKLTGELYMRSYWQV
YGLETVCLRYFNIFGPGQTPDSPYSGVMARFILQMMRGEQPVINGDGEQGRDFTYVDNAVEANLKALTAPAEKVAGRVFN
VATGERHTLNETYSILAGLLGHEAPPQYGPERSGDIRDSLADISAAQEAFAYAPQVGFEEGLRRTVAWYVAQYGASLKME
SVSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase Virulence SPI-7 Protein 2e-58 41
tviC NP_807944.1 VI polysaccharide biosynthesis epimerase Virulence SPI-7 Protein 2e-58 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AciX9_0220 YP_004216074.1 NAD-dependent epimerase/dehydratase VFG0430 Protein 8e-59 41