Gene Information

Name : AciX9_1426 (AciX9_1426)
Accession : YP_004217264.1
Strain : Granulicella tundricola MP5ACTX9
Genome accession: NC_015064
Putative virulence/resistance : Virulence
Product : ATPase AAA
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 1659584 - 1662049 bp
Length : 2466 bp
Strand : -
Note : KEGG: aca:ACP_2765 ATP-dependent Clp protease ATP-binding subunit ClpC; PFAM: ATPase AAA; ATPase AAA central domain protein; Clp domain protein; Clp ATPase-like; SMART: AAA ATPase

DNA sequence :
ATGTTCGAACGCTATACGGAGAAGGCGCGGCGGGTCATCTTTTTTGCCCGTTACGAGGCTAGTCAGTTTGGGTCGCCTTA
CATCGAGACGGAGCATCTTCTGCTCGGTCTACTGCGCGAGGACAAGGCACTGACCAACCGCTTTTTGCGGTCGCACGCGT
CAGTGGAGTCGATTCGGAAGCAGATTGAAGGACATACGACCATCCGCGAGAAGGTTTCGACCTCCGTGGATCTACCGCTC
TCAAACGAATGCAAGCGTGTGCTTGCGTATGCGGCTGAAGAGGCCGAACGCCTGAGCCACAAACACATTGGAACCGAGCA
CCTACTGCTGGGTCTGCTGCGCGAAGAGAAGTGCTTCGCTGCGGAGATTTTGCAGGAGCGCGGCCTGCGCCTCCCCGCCA
TCCGCGAGGAGCTTCAGCGCACCACCCAGGAGAAGCCGGCTGCGGCCGCGGCCAAGGCTGCACGGGGAGAACAGTCCATG
CTTGCAGAGTTCAGCCGTGATCTCACCCAGTCCGCCATGGATCAGCAGCTTGATCCGCTCGTCGGCCGCGACACCGAAGT
GGACCGCGTCATCCAGATCCTCTGCCGCCGCACCAAGAACAACCCGGTGCTGATCGGCGAGCCTGGCGTTGGTAAGACGG
CCATCGTCGAAGGCCTGGCGCAGAAGATCGCGGACGGCGAGGTGCCCTCGTTCCTTGCTGACAAGCGGGTCCTTGCGCTC
GATCTCTCACTGATCGTTGCGGGCACCAAATACCGCGGTCAGTTTGAGGAGCGTCTGAAGACCATCATGAAGGAGTTGAT
GGAGAATCAGAACTCTATCGTCTTCATCGATGAGTTGCATACGCTCGTCGGGGCCGGTTCGGCTGAGGGTTCGCTGGACG
CTGCCAACATCCTCAAGCCGGCGCTCAGCCGTGGTGAGATCCAGTGCATCGGCGCGACGACTCCGGCGGAGTATCGCAAG
TCGATCGAGAAGGATCGCTCGCTCGAGCGCCGCTTCCAGGCCGTCAAGGTGCCTCCTCCGAACGAAGAGGATGCGGTCAA
GATCATCATGGGCATCAAGGAGAAGTACGAGAAGTTTCACGCCGTCAGCTACACCGACGACGCGATCCAGTTCTCGGTCT
CGCACTCCTCGCGTTACATCCCGGACCGCTTCCTGCCGGACAAGGCGATCGACCTGATCGACGAGGCGGGGGCGCGGGTG
AAGCTGCGTCAGACTTCCCTTCCCGAGGAGCTGACCGAGGTGCAGAAGCGCATCAAGTTCATCGTTCACCGGATGGAGAA
CGCCATCGCGAACCACGAGTTCGAGAAGGCGCGCTTCTACTCGGACGAAGAGCGGAAGGAGCGGGAGAACCTCCGTGCTC
TGCGTGACAAGTATCACCTCGACGACTCCAGCGCGGGTATCGTGACGCGTGAGGATATTGAGGATGTTGTGAGCCGCTGG
ACTGGCGTGCCCATGACCTCCCTGAAGGAGGAGGAGACGGAGCGTCTGCTGCGGGTAGAGGAAGAGCTGCACAAGCGCGT
GATCTCGCAAGACAAGGCGATCTCGGCGCTGGCGCGTGCGATTCGGCGGTCTCGTGCCGGTTTGAAGAATCCGGCTCGTC
CGATTGGGAGCTTTTTGTTCCTGGGACCCACCGGCGTCGGTAAGACGGAGATGGCTCGTACGCTGGCGCAGTTCCTGTTC
GGGTCGGAGAAGTCGCTTATCCGGTTCGATATGTCCGAGTTCATGGAGAAACATTCGGTCAGCAAGCTGATTGGGTCGCC
TCCGGGGTATGTCGGGTACGAGGAGGGCGGTCAGTTGACCGAGCGCGTGAAGCGCAATCCATACTCCGTGGTGCTGCTGG
ATGAGATCGAAAAGGCTCACCCGGACGTCTACAACCTGCTGTTGCAGGTGTTTGAGGACGGACAGCTTACCGACGGTCTG
GGCAATACCGTGGACTTCAAGAACACCATCATCGTCATGACCTCGAACATTGGGGCCAAGCACCTGCAGAAGCAGCAGGG
ACTGGGCTTCCAGGCGAGCGACGAGAATATGGTGCTCGACAAGATGGAAGAGCTGGTCCGGGGCGAGGTCAAGAAGACCT
TCAACCCGGAGTTCCTGAACCGTCTGGACGAGATCATCATCTTCACCTCACTGGTGGAGTCTGACCTGATGCAGATTCTC
GAGATCCTCGTGCAGCAGCTCAATACGAACCTGGTGCATAAGGCGATCACGATTTCTGTGAACGACGACGCCAAGAAGTA
CATTCTGCAGAAGACGGCGAGCGACCGGACTTACGGTGCTCGGCCGCTGCGCCGGGCCCTGCAGCGGTTCGTCGAGGACC
CTCTGTCCGAGGCTCTGATCGCGGGCGGAATCAAGGAGCGGCCGGCGTTCCTGGAGGTCTACCTGGAGAACAACCAGCTC
TTCTATCGTCCGATCCTGGCCGATACGGAAGAGAAGGCTGCCGGGTTGGCTTTGACTACCGTTTAG

Protein sequence :
MFERYTEKARRVIFFARYEASQFGSPYIETEHLLLGLLREDKALTNRFLRSHASVESIRKQIEGHTTIREKVSTSVDLPL
SNECKRVLAYAAEEAERLSHKHIGTEHLLLGLLREEKCFAAEILQERGLRLPAIREELQRTTQEKPAAAAAKAARGEQSM
LAEFSRDLTQSAMDQQLDPLVGRDTEVDRVIQILCRRTKNNPVLIGEPGVGKTAIVEGLAQKIADGEVPSFLADKRVLAL
DLSLIVAGTKYRGQFEERLKTIMKELMENQNSIVFIDELHTLVGAGSAEGSLDAANILKPALSRGEIQCIGATTPAEYRK
SIEKDRSLERRFQAVKVPPPNEEDAVKIIMGIKEKYEKFHAVSYTDDAIQFSVSHSSRYIPDRFLPDKAIDLIDEAGARV
KLRQTSLPEELTEVQKRIKFIVHRMENAIANHEFEKARFYSDEERKERENLRALRDKYHLDDSSAGIVTREDIEDVVSRW
TGVPMTSLKEEETERLLRVEEELHKRVISQDKAISALARAIRRSRAGLKNPARPIGSFLFLGPTGVGKTEMARTLAQFLF
GSEKSLIRFDMSEFMEKHSVSKLIGSPPGYVGYEEGGQLTERVKRNPYSVVLLDEIEKAHPDVYNLLLQVFEDGQLTDGL
GNTVDFKNTIIVMTSNIGAKHLQKQQGLGFQASDENMVLDKMEELVRGEVKKTFNPEFLNRLDEIIIFTSLVESDLMQIL
EILVQQLNTNLVHKAITISVNDDAKKYILQKTASDRTYGARPLRRALQRFVEDPLSEALIAGGIKERPAFLEVYLENNQL
FYRPILADTEEKAAGLALTTV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 2e-173 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AciX9_1426 YP_004217264.1 ATPase AAA VFG0080 Protein 2e-142 52
AciX9_1426 YP_004217264.1 ATPase AAA VFG0079 Protein 0.0 49