Gene Information

Name : Rahaq_5085 (Rahaq_5085)
Accession : YP_004215784.1
Strain :
Genome accession: NC_015063
Putative virulence/resistance : Virulence
Product : pili assembly chaperone
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 31472 - 32173 bp
Length : 702 bp
Strand : +
Note : PFAM: Pili assembly chaperone, N-terminal; Pili assembly chaperone, C-terminal; KEGG: eta:ETA_33020 fimbrial chaperone protein

DNA sequence : 
ATGTCAGGTTTCCCATTACGCAGTACTTTTATTGCCGTTCTGATGTCTGCTGCTTGCCTTGCACCTTCACTGGCGAGTGC
AGGGGGCATCATGCTGGGCGGAACCCGTGTGATTTATCCGGCAGGCCAGAAACAGGTCACCATGTCGGTACGCAACACGT
CTGAACAAAGCAGCTTCCTGGTGCAATCATGGGTAGCCCAATCTGATGAGAAAAAGAGCCAGGATTTTGTCGTTACCCCG
CCGCTTTATGTCAGCGGCCCGGGTAATGAGAATACCCTTCGTCTGATGTATGTCGGCGTACCGCCATCGGCAGATCGGGA
AACTCTCTATTACTTTAACTCCAAGGCCATCCCTTCTATTGATAAGAAGGAAATGGAGGGTAAAAACATGCTGATGCTGG
CTGCTGTAACCCGTATCAAACTGTTCTATAGACCGGCAGGGCTTACCCCGACTGTTGAAAAAGCACCGGCAGAACTGACG
TTTCACCGGGCTGGCAGTCAGATGCGTATCGAAAACCCCACACCTTATTACCTCACACTGGCAGAAATCAAAGTGGGCGA
TCACAAGCTGCAGGACACCATGGTTTCACCGCGCAGCGATACCACACTTGCACTCCCAGCTGTAAACAGCGGGCAGGTGA
CATACCGAACCATTAACGATTTTGGTGCTGTGACTCCTGAAATGCGTGCGGAACTGAAATAG

Protein sequence : 
MSGFPLRSTFIAVLMSAACLAPSLASAGGIMLGGTRVIYPAGQKQVTMSVRNTSEQSSFLVQSWVAQSDEKKSQDFVVTP
PLYVSGPGNENTLRLMYVGVPPSADRETLYYFNSKAIPSIDKKEMEGKNMLMLAAVTRIKLFYRPAGLTPTVEKAPAELT
FHRAGSQMRIENPTPYYLTLAEIKVGDHKLQDTMVSPRSDTTLALPAVNSGQVTYRTINDFGAVTPEMRAELK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 3e-47 46
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 1e-44 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rahaq_5085 YP_004215784.1 pili assembly chaperone VFG0445 Protein 4e-55 50
Rahaq_5085 YP_004215784.1 pili assembly chaperone VFG0911 Protein 2e-44 46
Rahaq_5085 YP_004215784.1 pili assembly chaperone VFG1644 Protein 8e-45 46
Rahaq_5085 YP_004215784.1 pili assembly chaperone VFG0875 Protein 3e-46 46