Name : Rahaq_4946 (Rahaq_4946) Accession : YP_004215648.1 Strain : Genome accession: NC_015062 Putative virulence/resistance : Virulence Product : ABC transporter Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1108 EC number : - Position : 535420 - 536274 bp Length : 855 bp Strand : + Note : PFAM: ABC transporter; KEGG: ypb:YPTS_2423 ABC transporter DNA sequence : ATGACCGAACTGTTGCTGGAGCCGTTTCAGTACAACTATATGGTGAAAGCCATCTGGGTGAGTGCGGGGGTCGGTGCTGT GTGTGCATTTTTATCGGCGTATCTGATGCTCAAAGGCTGGTCACTGATGGGCGATGCGTTGTCGCATTCGGTAGTGCCCG GTGTCGCGGGCGCTTACGCGCTGGGCTTTCCCTACGCGATCGGCGCATTCGGGACCGGTATTCTGGCCGCACTTTGCATG ACACTGTTGCGTCACTTCACCAAACTGCGGGAAGACGCGATTATCGGTTTCGTGTTCTCCACGTTCTTTGCCCTTGGCCT GTTACTGGTATCGCTTAACCCGACATCCGTTAACGTGCAGTCGATTCTGTTCGGCAATATTTTAGGGATTGATGACGCCG ATATTTTACAGGTACAAATTATTGTCGGCGTTTCGCTGCTGGTGCTGTGTCTTATCTGGCGTGACCTGCTGGCGGTATTT TTCGACGAAGCGCATGCGGTTTCGGTCGGCCTTTCGCCGCTGTGGCTGAAAGTGATTTTCTTCACTATTTTCAGCGCGTG CAGCGTAGCGGCGTTACAAACTGTCGGCGCAATTTTAGTGATCGCAATGGTCATCACACCCGGCGCAACGGCCTATCTGC TGTCAGACCGTTTTTCACACCTGCTCATTATTTCTGTGATCATCGGTGCAGTGACCAGTGCAGCGGGGGCATGGCTGAGT TATTTCCTCGATGGTGCAACCGGCGGGGTGATTGTTTGTCTGCAAACCACCGTCTTCCTGCTGGCGTTCTTGTTCGCGCC GAAACATGGCTGGCTGGTGAATCATTTCCGCATTAAAAACCGGAGCCGCGCATGA Protein sequence : MTELLLEPFQYNYMVKAIWVSAGVGAVCAFLSAYLMLKGWSLMGDALSHSVVPGVAGAYALGFPYAIGAFGTGILAALCM TLLRHFTKLREDAIIGFVFSTFFALGLLLVSLNPTSVNVQSILFGNILGIDDADILQVQIIVGVSLLVLCLIWRDLLAVF FDEAHAVSVGLSPLWLKVIFFTIFSACSVAALQTVGAILVIAMVITPGATAYLLSDRFSHLLIISVIIGAVTSAAGAWLS YFLDGATGGVIVCLQTTVFLLAFLFAPKHGWLVNHFRIKNRSRA |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
sitC | AAD41067.1 | SitC | Virulence | centisome 63 pathogenicity island | Protein | 1e-75 | 62 |
sitC | YP_217783.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 2e-75 | 62 |
sitC | NP_461784.1 | permease | Virulence | SPI-1 | Protein | 2e-75 | 62 |
sitC | NP_457257.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 2e-75 | 62 |
sitC | NP_806466.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 2e-75 | 62 |
sitD | NP_461785.1 | permease | Virulence | SPI-1 | Protein | 9e-44 | 43 |
sitD | AAD41068.1 | SitD | Virulence | centisome 63 pathogenicity island | Protein | 6e-44 | 43 |
sitD | NP_806467.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 2e-43 | 42 |
sitD | YP_217784.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 2e-43 | 42 |
sitD | NP_457258.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 2e-43 | 42 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
Rahaq_4946 | YP_004215648.1 | ABC transporter | BAC0441 | Protein | 1e-100 | 79 |
Rahaq_4946 | YP_004215648.1 | ABC transporter | BAC0351 | Protein | 8e-76 | 62 |
Rahaq_4946 | YP_004215648.1 | ABC transporter | BAC0352 | Protein | 4e-44 | 43 |
Rahaq_4946 | YP_004215648.1 | ABC transporter | BAC0442 | Protein | 4e-41 | 41 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
Rahaq_4946 | YP_004215648.1 | ABC transporter | VFG0527 | Protein | 8e-76 | 62 |
Rahaq_4946 | YP_004215648.1 | ABC transporter | VFG0528 | Protein | 4e-44 | 43 |