Gene Information

Name : Rahaq_4702 (Rahaq_4702)
Accession : YP_004215409.1
Strain :
Genome accession: NC_015062
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 263101 - 263820 bp
Length : 720 bp
Strand : -
Note : KEGG: dze:Dd1591_0080 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGATGGAATCACTGGTAGAACTCACTGACGTGAATAAGATTTTTTTGACCGATGAAATTGAGACACACGCCCTGAGCAA
GATCACGCTCAGCATTTCCAAAGGGGAATACGTGGCGATTTCCGGGCCTTCAGGCTGTGGTAAATCAACGCTGCTTTCGA
TTTTGGGTCTGCTCGATGTGGCCTCTACCGGGACCTATCAGCTGGCCGGGCACAACGTGGAAAATATTTCTAAAAAGCAG
CGTGCCCTGGTGAGAAATCGTGATATCGGCTTTATCTTTCAGTCATTTAATCTCATCAGCGATTTAACCATTGAGGAAAA
TGTCTCCCTGCCACTGACTTACCGCAAGGATATTTCTAAAACTGAACGGCAGCAGAGAGTGGCGGAAGCCTTAGACAAGG
TCAATATGTCCCACCGGGGACGCCATTATCCCTCGCAGCTTTCCGGCGGACAGCAGCAGCGCGTGGCCGTCGCACGGGCT
ATCGTGGGCAATCCCTCCATCATTCTGGCGGATGAACCGACCGGTAACCTGGACTCCCACAATGCCGAGGCGGTGCTGAA
TATTCTCGATAAGTTACATCAGGAGGGCGCCACGATCTGCATCGTCACCCATGATCCTCGTTCAGCCGAGCGGGCGCAGC
GCAGCATCGTGCTTTCTGACGGGCAGGTCGTCGGAGACGGACATGTGGCACGGGAACTGACCCTGATAAAGGAAGCATAA

Protein sequence : 
MMESLVELTDVNKIFLTDEIETHALSKITLSISKGEYVAISGPSGCGKSTLLSILGLLDVASTGTYQLAGHNVENISKKQ
RALVRNRDIGFIFQSFNLISDLTIEENVSLPLTYRKDISKTERQQRVAEALDKVNMSHRGRHYPSQLSGGQQQRVAVARA
IVGNPSIILADEPTGNLDSHNAEAVLNILDKLHQEGATICIVTHDPRSAERAQRSIVLSDGQVVGDGHVARELTLIKEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-32 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-34 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-34 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-34 42
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 1e-32 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rahaq_4702 YP_004215409.1 ABC transporter NC_012469.1.7686878. Protein 1e-50 47
Rahaq_4702 YP_004215409.1 ABC transporter NC_008702.1.4606598. Protein 5e-46 47
Rahaq_4702 YP_004215409.1 ABC transporter NC_012469.1.7686946. Protein 4e-32 43
Rahaq_4702 YP_004215409.1 ABC transporter CP001581.1.gene798.p Protein 2e-38 43
Rahaq_4702 YP_004215409.1 ABC transporter NC_012469.1.7685735. Protein 2e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rahaq_4702 YP_004215409.1 ABC transporter VFG0869 Protein 9e-25 41