Gene Information

Name : Rahaq_4563 (Rahaq_4563)
Accession : YP_004215271.1
Strain :
Genome accession: NC_015062
Putative virulence/resistance : Virulence
Product : type VI secretion protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3516
EC number : -
Position : 124539 - 125033 bp
Length : 495 bp
Strand : +
Note : KEGG: spe:Spro_1783 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: Uncharacterised conserved protein UCP028301

DNA sequence :
ATGTCTAATAGCTTCCAGAATGAAATTCCGAAAGCGCGCGTTAACATAAAACTTGATCTACACACTGGCGGCGCACAGAA
GAAAGTCGAATTACCGTTAAAATTGATGGTAATGGGTGATTACAGTAATGGAAAAGAGAACCGTCCGTTATCTGAACGCG
AAAAAGTTAACATTAATAAGAATAACTTTAACAGCGTACTGGCTGAATTCAGCCCTTCACTGAACCTGACCGTGGAAAAT
ACGCTAACAGGTGATCGCAGCGAAGAAAATATCTCTCTAAATTTCAATGAAATGAAAGATTTTGAGCCAGAACAGGTTGC
CCGTCAGATCCCCCAACTGCGCGCGATGCTGGCAATGCGTAACTTATTACGTGACCTCAAATCCAATCTGCTCGACAACG
TCACCTTCCGTAAAGAGCTCGAAGCCATTCTAAAAGATCCTGCGCTGAGCAATGAACTGCGCACTGAACTTAATGCCCTG
GCGCCAAAGGCGTAA

Protein sequence :
MSNSFQNEIPKARVNIKLDLHTGGAQKKVELPLKLMVMGDYSNGKENRPLSEREKVNINKNNFNSVLAEFSPSLNLTVEN
TLTGDRSEENISLNFNEMKDFEPEQVARQIPQLRAMLAMRNLLRDLKSNLLDNVTFRKELEAILKDPALSNELRTELNAL
APKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HH0248 NP_859779.1 hypothetical protein Not tested HHGI1 Protein 1e-17 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rahaq_4563 YP_004215271.1 type VI secretion protein VFG2092 Protein 7e-19 42