Gene Information

Name : Rahaq_0936 (Rahaq_0936)
Accession : YP_004211688.1
Strain : Rahnella sp. Y9602
Genome accession: NC_015061
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1126
EC number : -
Position : 1002793 - 1003545 bp
Length : 753 bp
Strand : +
Note : KEGG: spe:Spro_0935 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence :
ATGCCACTGATCACCATCAACCAGGTTCAGAAATTTTACGGTCAGAACCACGTACTGAAAGGCGTGGATCTGGATATTGA
CAGCGGCGAAGTGATTTCGATCATCGGCCGCAGCGGTTCAGGGAAAAGTACGCTGTTGCGCTGCATGAACGGGCTGGAAG
GCTATCAGGAAGGCAGCATCAAACTCGGCGGGATGACCATTACCGACCGCGATTCTCAGGCGCGTGACATCAGCCGTTCC
GTGGGCATGGTGTTCCAGAGTTTCAATCTTTTCCCGCACATGACCGCGCTGGAAAACGTCATGCTGGCGCCACGCCGCGT
GCTGAAAAAGTCCGCTGCCGAATGCCGTGAACTGGCCGCGCAGATGCTGGCGAAAGTCGGTCTGGCGGATCGCATGGATT
ATTACCCGTCGAATCTTTCCGGCGGCCAGCAGCAACGCGTGGCGATTGCCCGTGCGCTGGCCATGAACCCGAAAGTGCTG
CTGTGTGATGAAATCACCTCGGCGCTGGATCCGGAACTGGTCGGCGAAGTATTGAAAGTGCTCGAGCAACTGGCGAAAGA
AGGCATGACGCTGGTGCTGGTGACACACGAAATGAATTTTGCCCGCGAAGTGGGTGACCGCGTGGTGTTTATGCATCAGG
GCACCGTGTGGGAACAGGGCGAAAGCCGGGCGCTGTTTGCTAACCCGCAAACGCCGGAGTTAAAACAATTTATAGCATCC
GTACGCGGCCTTACTGAGGCTACCGCAAGCTAA

Protein sequence :
MPLITINQVQKFYGQNHVLKGVDLDIDSGEVISIIGRSGSGKSTLLRCMNGLEGYQEGSIKLGGMTITDRDSQARDISRS
VGMVFQSFNLFPHMTALENVMLAPRRVLKKSAAECRELAAQMLAKVGLADRMDYYPSNLSGGQQQRVAIARALAMNPKVL
LCDEITSALDPELVGEVLKVLEQLAKEGMTLVLVTHEMNFAREVGDRVVFMHQGTVWEQGESRALFANPQTPELKQFIAS
VRGLTEATAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-24 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-26 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-26 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-26 42
SAR0461 YP_039910.1 ABC transporter ATP-binding protein Not tested vSa¥á Protein 3e-33 41
SAS0419 YP_042546.1 ABC transporter ATP-binding protein Not tested vSa¥á Protein 2e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rahaq_0936 YP_004211688.1 ABC transporter NC_012469.1.7685735. Protein 3e-27 44