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Name : Rahaq_0880 (Rahaq_0880) Accession : YP_004211632.1 Strain : Rahnella sp. Y9602 Genome accession: NC_015061 Putative virulence/resistance : Virulence Product : lysine decarboxylase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1982 EC number : 4.1.1.18 Position : 946178 - 948325 bp Length : 2148 bp Strand : + Note : KEGG: spe:Spro_3773 lysine decarboxylase; PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein DNA sequence : ATGAATATTATCGCTATCATGCGCCCGGAAGGGGCTTACTACAAAGACGAGCCGATCCGTGAACTGGATAGCGCGCTGAC GCTTCTCGGATTTCAGGTCATTTATCCGCGCGATCGTGCGGATCTGCTCAAACTCATCGAAAATAATGCCCGCATTTGCG GCGCTATTTTCGACTGGGATCAGCATAGCGAAGAGCTGTGTACAGCCATTAATGAGCTGAATGAATATCTGCCGCTTTAC GCTTTCATCAATACGCATTCGACGCTGGACGTCGACGTTAATGAAATGCGCATGGTGCTCTATTTCTTTGAATACGCACT GAGTGCGGCGGAGGATATTGCCAAACGCATCCGCCAGTACACCGATGAATACATCGATACCATTACACCGCCGCTGACTA AAGCGTTGTTCACCTACGTAGAAGAAGGAAAGTACACTTTCTGTACGCCGGGGCATATGGCCGGTACGGCGTTTTTAAAA AGCCCGGTAGGGACGTTGTTCTATGATTTTTTCGGGGCCAAAACGTTGAAAGCCGATGTGTCGATTTCTGTGACAGAACT TGGTTCCCTGTTGGATCACACTGGTCCGCATCTAGAGGCGGAGGAATATATCGCCCGTACTTTCGGCGCCGAGCAAAGTT ATATCGTCACTAATGGCACCTCGACGGCCAATAAAATTGTCGGAATGTATGCGGCACCGGCAGGGAGTACGGTGCTGATT GACCGCAACTGTCATAAATCGCTCGCCCATCTGATGATGATGACCAATATTGTGCCGGTCTATTTGCGCCCCAATCGCAA CGCGTATGGCATTCTTGGCGGGATTCCTAAGCATGAATTCACCCGCGAAAGCATCGAAGATAAAATTGCACAGACAGAGA ATGCCACCTGGCCAGTGCACGCAGTGATCACTAACTCGACTTACGACGGCTTGCTGTACAACACGGATTACATCAAAAAC ACACTGGATGTTCCGTCGATTCATTTCGATTCTGCATGGGTGCCATACACTAATTTCCATCCGATTTATGACGGTAAAAG CGGAATGAGCGGCGAGCGCATTCCCGGAAAAGTCATTTACGAAACGCAATCAACGCACAAACTACTGGCAGCTTTCTCTC AGGCATCGATGATTCACATTAAGGGTGATTACAACGAAAGTACCTTTAATGAAGCCTATATGATGCACACCACAACATCG CCAAATTACGGCATTGTGGCTTCTGCAGAAACTGCCGCGGCGATGTTGCGCGGTAACCCCGGACGGCGTCTCATTAACCG CTCGGTTGAACGCGCGCTGCATTTCCGTAAGGAGATACAGCGGTTGCGGGAAGAAACCGAGGGCTGGTTCTTTGATATCT GGCAGCCTGAATATATTGATGAAGCCGAGTGCTGGCCGCTGAATCCCGATCAAAACTGGCACGGTTTTGCCAACGCCGAT ACCGATCATATGTATCTTGATCCGATCAAAGTGACGATCCTGACACCCGGAATGGATGAAACGGGTAAGCTGGAAGAACA GGGGATCCCGGCGGCGTTAGTGGCGAAATTCCTCGATGAGCGCGGTGTGGTGGTAGAAAAAACCGGCCCGTACAATCTGC TTTTCCTGTTCAGTATCGGCATTGATAAAACCAAATCCATGAGTCTGATGCGCGGCCTGACTGATTTTAAGCGCAGTTAT GATCTCAATTTGCGGGTCAAGAATATGCTGCCTGATCTGTATGCGGAAGATCCTGATTTTTATCGCAATATGCGGATTCA GGATCTGGCGCAGGGGATCCACAAACTGATCGTTCGTCACGACCTGCCGCGTTTAATGTTGGAAGCATTTGATGTGCTGC CGGAAATGAAAATGACGCCGTACGAAATGTTCCAGCATCAGGTACGCGGACATATTGATGAATGCGACATTGATGAACTG GTCGGCAAAGTGTCAGCCAACATGATCCTGCCTTATCCGCCGGGTGTACCTGTGGTGATGCCGGGCGAGATGATCACGGA AGAAAGTCGGGCTGTGCTCGATTTCCTGATTATGCTTTGTTCAATAGGCGAGCGTTACCCTGGTTTTGAAACTGATATTC ATGGAACGCGGCTCACAGAAGACGGGCGCTATCTGGTGAAGGTCTTAAAACTTCCGGAAGCGGGTTAG Protein sequence : MNIIAIMRPEGAYYKDEPIRELDSALTLLGFQVIYPRDRADLLKLIENNARICGAIFDWDQHSEELCTAINELNEYLPLY AFINTHSTLDVDVNEMRMVLYFFEYALSAAEDIAKRIRQYTDEYIDTITPPLTKALFTYVEEGKYTFCTPGHMAGTAFLK SPVGTLFYDFFGAKTLKADVSISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYIVTNGTSTANKIVGMYAAPAGSTVLI DRNCHKSLAHLMMMTNIVPVYLRPNRNAYGILGGIPKHEFTRESIEDKIAQTENATWPVHAVITNSTYDGLLYNTDYIKN TLDVPSIHFDSAWVPYTNFHPIYDGKSGMSGERIPGKVIYETQSTHKLLAAFSQASMIHIKGDYNESTFNEAYMMHTTTS PNYGIVASAETAAAMLRGNPGRRLINRSVERALHFRKEIQRLREETEGWFFDIWQPEYIDEAECWPLNPDQNWHGFANAD TDHMYLDPIKVTILTPGMDETGKLEEQGIPAALVAKFLDERGVVVEKTGPYNLLFLFSIGIDKTKSMSLMRGLTDFKRSY DLNLRVKNMLPDLYAEDPDFYRNMRIQDLAQGIHKLIVRHDLPRLMLEAFDVLPEMKMTPYEMFQHQVRGHIDECDIDEL VGKVSANMILPYPPGVPVVMPGEMITEESRAVLDFLIMLCSIGERYPGFETDIHGTRLTEDGRYLVKVLKLPEAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cadA | NP_756988.1 | lysine decarboxylase, inducible | Not tested | PAI II CFT073 | Protein | 0.0 | 74 |
| unnamed | CAD66195.1 | putative cadaverin decarboxylase | Virulence | PAI III 536 | Protein | 0.0 | 66 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Rahaq_0880 | YP_004211632.1 | lysine decarboxylase | VFG1670 | Protein | 0.0 | 66 |
