Gene Information

Name : Rahaq_0717 (Rahaq_0717)
Accession : YP_004211471.1
Strain : Rahnella sp. Y9602
Genome accession: NC_015061
Putative virulence/resistance : Unknown
Product : baseplate J family protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3948
EC number : -
Position : 763855 - 764763 bp
Length : 909 bp
Strand : -
Note : PFAM: Baseplate J family protein; KEGG: xne:XNC1_1190 baseplate assembly protein J (GpJ)

DNA sequence :
ATGGCAACGATCGATTTAAGCCAGTTACCGCCCCCTGATGTGGTCGAAGAACTGGATTATGAAAGCCTGCTTGAAGAACG
TAAAACGACGCTGATTTCGCTCTATCCAGCCGATCAGCAGGAGGCCATCAGCCGCACGCTGACGCTGGAATCCGAACCGC
TGGTCAAACTGTTGCAGGAGAATGCCTACCGCGAACTGATCCTGCGCCAGCGGGTGAACGAAGCCGCACGCGCCGTGATG
GTGGCCTATGCGACGGGCAGTGATCTGGATCAGCTTGCGGCGAATTTCAACGTTCAGCGCCTGGTTTTACAGCCTGCGGA
TATCAATACAATCCCCCCAAAAGCCGCCGTTCTAGAAGCCGATAGCGATTTACGCGTGCGTATTCCTCAGGCGTTCGAAG
GGTTGAGCGTGGCGGGCCCGACCGGAGCTTACGAATATCATGCTCGTTCGGCAGACGGACGCATTGCGGATGCATCGGCT
ATCAGCCCGTCTCCCGCTGAAGTGACCGTCACTATTTTGTCACGAGACAACGATGGCGTTGCCTCTGATGACTTGCTCAT
TGCCGTTGAAAAAGCCCTGAACGATGAAGATGTCAGGCCTGTTGCCGATCGCGTCACAGTACAGGCAGCTGAGATTGTGC
CTTATCAGATTGATGCCGTGCTGTATGTTTTGCCTACGCCCGAAATTGAGCCCGTCCGTGCGGCGTCTGAAGCGCAGCTG
AAAACCTACATCAACACGCAAAGCCGGTTAGGTCGCGATATCCGGCTTTCTGCAATTTATGCCGCTTTGCACGTTGAGGG
CGTTCAGCGGGTAGAGCTGTCGTCACCGCTGGCGGATATCGTGCTTGATAAAACTCAGGCGTCACTCTGTACCGGTTACT
CACTGACAGTGGGAGGCTCGGATGAGTGA

Protein sequence :
MATIDLSQLPPPDVVEELDYESLLEERKTTLISLYPADQQEAISRTLTLESEPLVKLLQENAYRELILRQRVNEAARAVM
VAYATGSDLDQLAANFNVQRLVLQPADINTIPPKAAVLEADSDLRVRIPQAFEGLSVAGPTGAYEYHARSADGRIADASA
ISPSPAEVTVTILSRDNDGVASDDLLIAVEKALNDEDVRPVADRVTVQAAEIVPYQIDAVLYVLPTPEIEPVRAASEAQL
KTYINTQSRLGRDIRLSAIYAALHVEGVQRVELSSPLADIVLDKTQASLCTGYSLTVGGSDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4613 NP_458695.1 probable phage baseplate assembly protein Not tested SPI-7 Protein 4e-94 67
t4307 NP_807903.1 phage baseplate assembly protein Not tested SPI-7 Protein 4e-94 67
unnamed ABR13480.1 predicted baseplate or tail fiber base Not tested PAGI-6 Protein 6e-65 56