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Name : Rahaq_0578 (Rahaq_0578) Accession : YP_004211332.1 Strain : Rahnella sp. Y9602 Genome accession: NC_015061 Putative virulence/resistance : Unknown Product : phage portal protein, PBSX family Function : - COG functional category : R : General function prediction only COG ID : COG5518 EC number : - Position : 620281 - 621312 bp Length : 1032 bp Strand : - Note : KEGG: yps:YPTB1764 capsid portal protein; TIGRFAM: phage portal protein, PBSX family; PFAM: portal protein DNA sequence : ATGAGTAAGCGAAAATTTCGCAAGGCGGCACAAACAGCAGTTACAGCAACCGCACAGCAGACCGGCGGCGCGGAGGCGTT CAGCTTTGGCGACCCGACGCCGGTATTAGACCGCCGTGAAATCCTGGATTACATCGAATGCACCGGTAACGGCCAGTGGT ATGAGCCGCCGGTCAGCTTTGACGGCCTGGCTCGTACGTTGCGTGCTGCGGTGCATCACAGTTCATCGCTGTATGTGAAA CGGAATATTCTGGCCTCGACCTTCGTCCCGCACCCGCTGTTATCACAGCAGGAGTTCAGCAGGTTCGCACTGGATTATCT GGTGTTCGGGAATGCGTTTTTGGAAGTGATCCGCAACCAGCTCGGCGACGCCGTGGTGATGAAAACCGTGCCCGCCAAAT ATGCCCGCCGAGGGGTTGAGCCAGATACTTACTGGTTTGTGCAGCAGTGGAAGGACGCGCATCAGTTTGAGGCGGGCAGC GTGTTTCAGCTGATTGAGCCGGACATTAATCAGGAGCTGTACGGCCTGCCGGAATACCTCAGCGCGCTGAATTCTGCCTG GCTGAATGAGGCCGCGACGCTGTTCCGCCGCAAGTACTACCAGAACGGCGCGCACGCCGGTTATATTCTCTACATGACAG ATGCAGCACAAAGCAGCTCGGACATCGATCAGATGCGTAAAGCAATGCGGGACACCAAAGGGCTGGGCAATTTCCGCAAC CTGTTCATGTACGCACCGAACGGCAAGCCGGACGGGATCAAAATTCTGCCGCTGAGTGAAGTCGCCACCAAGGACGATTT CTTTAACATCAAGAAAGCCAGCCAGAACGATTTGCTGTGCGCGCACCGCGTTCCGCCTCAGATGATGGGGATTATTCCGG AGAACAGTGGCGGGTTTGGGGATTCGGTTAAGGCGTCGCAAGTGTTTGTGCGTAATGAGCTGACGCCGTTGCAGGAACGG TTTAAGGAGTTGAATGCGTGGTTTGGGCAGGTGGTGATTAGGTTTACTTCTTATGAGCTTACGTCAGAGTAA Protein sequence : MSKRKFRKAAQTAVTATAQQTGGAEAFSFGDPTPVLDRREILDYIECTGNGQWYEPPVSFDGLARTLRAAVHHSSSLYVK RNILASTFVPHPLLSQQEFSRFALDYLVFGNAFLEVIRNQLGDAVVMKTVPAKYARRGVEPDTYWFVQQWKDAHQFEAGS VFQLIEPDINQELYGLPEYLSALNSAWLNEAATLFRRKYYQNGAHAGYILYMTDAAQSSSDIDQMRKAMRDTKGLGNFRN LFMYAPNGKPDGIKILPLSEVATKDDFFNIKKASQNDLLCAHRVPPQMMGIIPENSGGFGDSVKASQVFVRNELTPLQER FKELNAWFGQVVIRFTSYELTSE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| t4321 | NP_807917.1 | capsid portal protein | Not tested | SPI-7 | Protein | 6e-108 | 67 |
| STY4628 | NP_458710.1 | probable capsid portal protein | Not tested | SPI-7 | Protein | 6e-108 | 67 |
| unnamed | ABR13463.1 | predicted capsid packaging protein | Not tested | PAGI-6 | Protein | 5e-84 | 56 |
