|
Name : Rahaq_0552 (Rahaq_0552) Accession : YP_004211307.1 Strain : Rahnella sp. Y9602 Genome accession: NC_015061 Putative virulence/resistance : Virulence Product : transport system permease Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0609 EC number : - Position : 599389 - 600390 bp Length : 1002 bp Strand : - Note : PFAM: transport system permease protein; KEGG: spe:Spro_3424 iron-enterobactin transporter membrane protein DNA sequence : ATGTCCCGCTCAATAAAAAATCTCACAGCGCTGTTGGTTGCCTTGTTTTTGCTCTGCCTGATGATGGCGCTGAGTCTGGT GCTGGGCGAGAAATCGCTTGCGTCCGGCACCGTGATGTCAGCGCTTAACGGCCAGTGCACTGGGGCGGACTGCGTGATTG TCACCGATGCCCGTGTGCCGCGCACGCTGGCCGGTTTGCTGGCAGGGATGGCGCTCGGATTATCCGGTGCGCTGATGCAA ATCCTCACCCGCAATCCGCTGGCTGATCCCGGTATTCTTGGCGTTAATGCGGGTGCGGCTTTCGCGGTGGTTATCGGTAT CTCCTTTTTTGGCGCAACGGATGTCAGCCACTATTTGTGGTTCGCGTTTGCCGGTGCCTTACTGGCAACATTGCTGGTCG CCATGATCGGCGCGCTGGGACGCGGAAAGCTGGATCCGGTACGCTTAACTCTGGCGGGCGTCGCGCTCGGCGCTGTGCTG GAAGGCATGTCTTCGGGGATTTCCCTGCTCAACCCGACCGTCTACGATCAGTTGCGATTCTGGCAGGCTGGCTCGCTGGA TATCCGCAATATTACCGTGATTAAAACCATCACACCGCCGGTGACTTTTGCGGTTGCCCTGAGCTTACTGATGGCCCGTT CCCTGAATAATCTGACGATGGGCAACGAACTGGCGACGGCGCTCGGCACCAAAATCGCGACCACGCAGTTGCTGGGATTA CTGGCGATTACGTTGTTGTGCGGCAGCGCCACAGCGGCTGTCGGCCCCATCGCCTTTGTCGGCCTGATGGTGCCGCATAT GGCGCGCTGGATCTGTCGTGCGGATCCGCGCTGGATGCTGCCGTGGACGCTGGTGTTAACCCCGACGCTGTTGCTGGCAG CCGATATCGCCGGGCGTTTTCTGGTTACCGGAGAATTGCGGGTTTCCGTGGTGGTCGCCTTTATCGGCGCGCCGGTGCTT ATTTTCCTGGTACGCCGTCCCGGTGGATTACACAGAGGTTAA Protein sequence : MSRSIKNLTALLVALFLLCLMMALSLVLGEKSLASGTVMSALNGQCTGADCVIVTDARVPRTLAGLLAGMALGLSGALMQ ILTRNPLADPGILGVNAGAAFAVVIGISFFGATDVSHYLWFAFAGALLATLLVAMIGALGRGKLDPVRLTLAGVALGAVL EGMSSGISLLNPTVYDQLRFWQAGSLDIRNITVIKTITPPVTFAVALSLLMARSLNNLTMGNELATALGTKIATTQLLGL LAITLLCGSATAAVGPIAFVGLMVPHMARWICRADPRWMLPWTLVLTPTLLLAADIAGRFLVTGELRVSVVVAFIGAPVL IFLVRRPGGLHRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fagA | YP_005680309.1 | hypothetical protein | Not tested | PiCp 1 | Protein | 7e-25 | 44 |
| fagA | YP_005682399.1 | hypothetical protein | Virulence | PiCp 1 | Protein | 7e-25 | 44 |
| fagA | YP_003782432.1 | integral membrane protein | Virulence | PiCp 1 | Protein | 7e-25 | 44 |
| fagA | YP_005684490.1 | hypothetical protein | Not tested | PiCp 1 | Protein | 7e-25 | 44 |
| SPN23F_09540 | YP_002510937.1 | ferric siderophore ABC transporter permease | Virulence | PPI-1 | Protein | 1e-20 | 41 |
| SP_1033 | NP_345508.1 | iron ABC transporter permease | Virulence | PPI-1 | Protein | 1e-20 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Rahaq_0552 | YP_004211307.1 | transport system permease | VFG0926 | Protein | 6e-54 | 69 |
