Gene Information

Name : Rahaq_0049 (Rahaq_0049)
Accession : YP_004210809.1
Strain : Rahnella sp. Y9602
Genome accession: NC_015061
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 53612 - 55150 bp
Length : 1539 bp
Strand : +
Note : PFAM: Aldehyde Dehydrogenase; KEGG: ect:ECIAI39_4105 aldehyde dehydrogenase B

DNA sequence :
ATGGCCTATGATAAAAATCCTCATGCCGTCAAACCGGAAGAATACGGTTTCCCGCTGAAACTCAAAAAACAATACGACAA
CTTTATTGGCGGTGAATGGGTCGCGCCGGTAAAAAAAGAGTATTACGACAACCTGACGCCGGTTACCGGCGAAGTGCTGT
GTAAAGTGGCCAGTTCCAGCACCGATGACGTCGATCTGGCGCTGGATGCCGCCCATCAAGCCAAAGACGCGTGGGGAAAA
ATGCCGGTGCAGCAGCGTGCAAACTTACTGCTGAAAGTCGCCGATCGCATGGAACAAAATCTTGAACTGCTGGCAAATGC
CGAAACCTGGGATAACGGCAAACCGATCCGCGAAACCAGTGGTGCAGACGTGCCGTTAGCCATCGACCATTTCCGTTATT
TCGCCTCCTGCGTACGCGCACAGGAAGGCGGGATCAGCGAAATCGACAGCGAAACCGTGGCCTATCATTTCCACGAACCG
CTGGGCGTGGTGGCACAAATTATCCCGTGGAATTTCCCGCTGCTGATGGCGTGCTGGAAAATGGCACCGGCGCTGGCGGC
AGGTAACTGCATCGTACTCAAACCGGCCAAACTGACGCCGCTGTCGGTTCTGTTGCTGATGGAACTGGTGCAGGACATTC
TGCCTGCTGGCGTCATTAACGTGGTCAACGGCGCGGGCGGGGAAATCGGCGAATATCTGGCGACCTCCAAACGTATCGCC
AAAGTCGCTTTCACCGGTTCGACGGAAGTCGGCCAGCGGATCGCCGGCTATGCTGCACAAAACCTGATCCCGGCTACGCT
GGAACTGGGCGGTAAATCGCCGAATATTTTCTTCGCCGACGTGATGGATAAAGAGGACGAATTCTTCGACAAAGCGCTGG
AAGGGTTCGCGCTGTTTGCCTTCAATCAGGGCGAAGTCTGTACCTGTCCGAGCCGTGCGCTGGTGCAGGAGTCCATCTAC
GAACGCTTTATGGAACGGGCAATCAAACGCGTGGAAGCGATCAAAACCGGTAACCCGCTGGATATGGAAACCCAGATGGG
CGCGCAGGTGTCTGCCGGACAGATGAAAACCATTCTGGATTACATCGAAATCGGTAAAAATGAGGGCGCGGAAGTCCTGA
CCGGCGGTGCGAAGAAAAAACTTGAAGGTTCGCTGAACGAGGGTTATTACCTGCAACCGACCATCTTGCTGGGTAAAAAC
AATATGCGCGTCTTCCAGGAAGAAATTTTCGGACCGGTGCTGGCGGTAACGACATTCAAAGATATGGATGAGGCGTTACA
AATCGCCAACGATACGGCGTACGGGCTGGGGGCGGGTGTCTGGAGCCGTGACGGCAACGTGGCGTATCATATGGGGCGCA
ACATTCAGGCTGGCCGTGTCTGGACCAACTGCTATCACGCCTATCCGGCACATGCGGCATTCGGCGGTTACAAACAATCC
GGTATCGGGCGCGAAACCCATAAGATGATGCTGGATCACTATCAGCAAACGAAATGTTTACTGGTGAGTTATTCGAGTAA
ACCGATGGGGCTTTTCTGA

Protein sequence :
MAYDKNPHAVKPEEYGFPLKLKKQYDNFIGGEWVAPVKKEYYDNLTPVTGEVLCKVASSSTDDVDLALDAAHQAKDAWGK
MPVQQRANLLLKVADRMEQNLELLANAETWDNGKPIRETSGADVPLAIDHFRYFASCVRAQEGGISEIDSETVAYHFHEP
LGVVAQIIPWNFPLLMACWKMAPALAAGNCIVLKPAKLTPLSVLLLMELVQDILPAGVINVVNGAGGEIGEYLATSKRIA
KVAFTGSTEVGQRIAGYAAQNLIPATLELGGKSPNIFFADVMDKEDEFFDKALEGFALFAFNQGEVCTCPSRALVQESIY
ERFMERAIKRVEAIKTGNPLDMETQMGAQVSAGQMKTILDYIEIGKNEGAEVLTGGAKKKLEGSLNEGYYLQPTILLGKN
NMRVFQEEIFGPVLAVTTFKDMDEALQIANDTAYGLGAGVWSRDGNVAYHMGRNIQAGRVWTNCYHAYPAHAAFGGYKQS
GIGRETHKMMLDHYQQTKCLLVSYSSKPMGLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 8e-146 64
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-151 64
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-151 64
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-151 64
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 8e-151 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rahaq_0049 YP_004210809.1 aldehyde dehydrogenase VFG0082 Protein 3e-146 64