Gene Information

Name : Rahaq_4373 (Rahaq_4373)
Accession : YP_004215086.1
Strain : Rahnella sp. Y9602
Genome accession: NC_015061
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : -
Position : 4783672 - 4785753 bp
Length : 2082 bp
Strand : +
Note : TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; helicase domain protein; KEGG: spe:Spro_4871 ATP-dependent DNA helicase RecG; SMART: DEAD-like helicase ; helicase doma

DNA sequence :
ATGAAAGGCCGCCTGCTCGACGCCATCCCGCTGACGTCGCTTTCCGGCGTCGGAGCCAGTCAGGCAGACAAGCTCGCCAA
ACTCGGCCTTGAAACTATTCAGGATTTACTGCTTCATCTTCCTTTACGCTATGAAGATCGTACCCGCCTTTACACCATCA
ATGATTTACAGCCCGGCATTTTCGCCACCATAGAAGGCGAAGTGTTGCGTAGTGATATCAGTTTTGGCCGCCGCAGAATG
CTGACCTGTCAGATAAGTGACGGCACTGGCATGGCGACGTTGCGCTTCTTCAACTTTAACGCCGCGATGAAAAACAGCCT
GGCAACAGGTCGCCGTGTTACCGCTTATGGTGAAATCAAACGCGGCACGATCGGTGCTGAAATCATTCATCCGGAATACC
GCATTCAGGGTGAAAACAGCGAAGTCGTTCTGCAGGAATCACTGACGCCGGTTTATCCGACAACGGAAGGTATCCGCCAG
GCGACCTTGCGTAAACTGACGGATCAGGCACTTGAACTGCTCGACACCGTACCTGTCGCCGAACTGTTGCCAGAGGAACT
GAGTCGTTCGCTGATCCCGCTTCCTCAGGCGCTGCATTTGCTGCACCGCCCGCCGCCAGATATCCAGCTTGCAGACCTTG
AAAAAGGTCATCATCCGGCTCAACGCCGCCTGATTATGGAAGAACTTCTGGCACATAATCTCAGTATGCTGGCTGTCCGC
GCCGGTACGCAGAGTTATAAAGCTCTGCCGTTGCATCATGACGACCGCCTGAAAAATCAGTTCCTCGCGTCGCTTCCTTT
CAGCCCGACCGGTGCGCAAGCACGGGTTGTGGCAGAAATTGAACAGGACCTGGCAAAAAGTTATCCCATGATGCGTCTGG
TGCAGGGCGACGTGGGATCAGGTAAAACGCTGGTAGCCGCCCTCGCCGCACTTTGCGCTATTGCTCAGGGCCAACAGGTC
GGATTAATGGCGCCGACAGAATTGCTGGCCGAACAGCATGCCAATAATTTCCGTCAGTGGTTTGAGCCACTGGGTATTCA
GGTCGGCTGGCTGGCGGGCAAACAAAAGGGTAAAGCCCGGCAGGCACAGCAGGATGCGATCGCCAGCGGACAGGTGTCGA
TGGTGGTGGGAACGCACGCTATCTTCCAGGAACAGGTTTTGTTCTCGTCACTGTCGCTGGTCATTATCGATGAACAGCAC
CGTTTCGGTGTGCATCAGCGTCTGGCGTTGTGGGAAAAAGGTCTGCAACAGGGCTTCCATCCACATCAGTTGATCATGAC
CGCCACGCCGATCCCACGCACACTGGCAATGACGGCTTACGCTGATCTTGATACCTCTGTGATCGACGAACTCCCGCCAG
GCCGCACGCCGGTGACTACTGTCGCCATTCCGGACACCCGCCGCAGTGACATTATCAGCCGTGTCAAAAGTGCCTGCGAG
CAGGAAAATCGTCAGGCTTATTGGGTGTGTACGCTGATTGAAGAATCGGAAATGCTGGAAGCGCAGGCCGCTGAAGCCAC
ATGGGAAGGCCTGAAGGAGGCACTCCCGGCGCTGAATATTGGACTGGTTCACGGTCGTATGAAAGCCCAGGAAAAGCAGG
CCGTTATGCAGGCATTCAAACAGGGTGAAGTGCAGCTTCTGGTGGCAACGACTGTCATTGAAGTCGGCGTTGACGTACCG
AATGCCAGCCTGATGATTATCGAAAACCCGGAGCGTTTAGGGCTGGCGCAGTTGCACCAGTTACGTGGGCGCGTTGGACG
TGGTGCCGTTGCTTCTCACTGTGTACTGCTCTACAAAACGCCGCTCAGCAAAACAGCGCAGAAACGTTTGCAGGTTTTAC
GCGACAGCAACGATGGCTTTGTTATCGCACAGCAGGATTTGGAAATCCGCGGGCCGGGTGAACTACTGGGCACGCGCCAG
ACCGGCAGCGCTGAATTTAAAGTCGCTGATTTATTACGTGATCAGGCGATGATCCCGGATGTACAGCGCATTGCGCGTTA
TCTGCAGCAACAATTCCCTGATCATGCCAAAGCTCTGATTGAGCGCTGGCTGCCAGAAAGAGTCCGTTACACCAACGCCT
GA

Protein sequence :
MKGRLLDAIPLTSLSGVGASQADKLAKLGLETIQDLLLHLPLRYEDRTRLYTINDLQPGIFATIEGEVLRSDISFGRRRM
LTCQISDGTGMATLRFFNFNAAMKNSLATGRRVTAYGEIKRGTIGAEIIHPEYRIQGENSEVVLQESLTPVYPTTEGIRQ
ATLRKLTDQALELLDTVPVAELLPEELSRSLIPLPQALHLLHRPPPDIQLADLEKGHHPAQRRLIMEELLAHNLSMLAVR
AGTQSYKALPLHHDDRLKNQFLASLPFSPTGAQARVVAEIEQDLAKSYPMMRLVQGDVGSGKTLVAALAALCAIAQGQQV
GLMAPTELLAEQHANNFRQWFEPLGIQVGWLAGKQKGKARQAQQDAIASGQVSMVVGTHAIFQEQVLFSSLSLVIIDEQH
RFGVHQRLALWEKGLQQGFHPHQLIMTATPIPRTLAMTAYADLDTSVIDELPPGRTPVTTVAIPDTRRSDIISRVKSACE
QENRQAYWVCTLIEESEMLEAQAAEATWEGLKEALPALNIGLVHGRMKAQEKQAVMQAFKQGEVQLLVATTVIEVGVDVP
NASLMIIENPERLGLAQLHQLRGRVGRGAVASHCVLLYKTPLSKTAQKRLQVLRDSNDGFVIAQQDLEIRGPGELLGTRQ
TGSAEFKVADLLRDQAMIPDVQRIARYLQQQFPDHAKALIERWLPERVRYTNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 5e-98 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rahaq_4373 YP_004215086.1 ATP-dependent DNA helicase RecG BAC0356 Protein 0.0 60