Gene Information

Name : Rahaq_4310 (Rahaq_4310)
Accession : YP_004215023.1
Strain : Rahnella sp. Y9602
Genome accession: NC_015061
Putative virulence/resistance : Unknown
Product : 20S proteasome subunits A/B
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG5405
EC number : -
Position : 4721440 - 4722021 bp
Length : 582 bp
Strand : +
Note : PFAM: 20S proteasome A and B subunits; KEGG: dze:Dd1591_0114 ATP-dependent protease peptidase subunit

DNA sequence :
GTGTCCCGCAAACCTGCGGGGATCTTTTCCGTCTGCAACGAGGAACCGCTCGTGACAACAATTGTAAGTGTACGCCGCAA
CGGCAAGGTCGTTATCGGTGGTGATGGCCAGGCCACATTGGGAAATACCGTCATGAAGGGCAACGTCAAAAAAGTACGTC
GCCTGTATAACGACAAAGTGATCGCGGGCTTTGCTGGCGGCACGGCTGATGCCTTCACGCTGTTTGAGCTGTTCGAACGC
AAACTGGAAATGCACCAGGGTCATCTGGTGAAAGCCGCCGTTGAACTGGCAAAAGACTGGCGTACCGACCGTATGTTACG
CCGTCTGGAAGCCCTTCTGGCCGTGGCCGATGAAAACGCCTCGCTTATCATCAGCGGTAACGGTGACGTTATCCAGCCTG
AAAACGATCTGATTGCCATTGGTTCCGGTGGCCCGTATGCCCAGGCTGCTGCACGCGCGTTGCTGGAAAACTCCGAGCTT
GAAGCGCGCGACATCGTCGAAAAATCGCTGAGCATCGCCGGTGACATCTGCATCTACACCAACCAATTCCACACTATCGA
AGAATTATCTTCTAAAGCGTAA

Protein sequence :
MSRKPAGIFSVCNEEPLVTTIVSVRRNGKVVIGGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELFER
KLEMHQGHLVKAAVELAKDWRTDRMLRRLEALLAVADENASLIISGNGDVIQPENDLIAIGSGGPYAQAAARALLENSEL
EARDIVEKSLSIAGDICIYTNQFHTIEELSSKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hslV YP_003728752.1 protein HslV Not tested cag PAI Protein 7e-33 56