Gene Information

Name : Rahaq_4304 (Rahaq_4304)
Accession : YP_004215017.1
Strain : Rahnella sp. Y9602
Genome accession: NC_015061
Putative virulence/resistance : Unknown
Product : O-succinylhomoserine (thiol)-lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 4714514 - 4715674 bp
Length : 1161 bp
Strand : -
Note : KEGG: eta:ETA_01270 cystathionine gamma-synthase; TIGRFAM: O-succinylhomoserine (thiol)-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein

DNA sequence :
ATGACGCACAAGCAAGCCACCATTGCCGTGGGCAGTGGCCTGAACAATGATCAGCAATATGGTTGTGTAGTTCCGCCAAT
CTACCTTTCCAGTACCTATAACTTTGAAGATTTCAACCAGCCAAGAGCCCATGACTATTCACGTCGCGGCAATCCGTCAC
GGGATGTTGTCCAGCGTGCGCTGGCTGATTTGGAAGGCGGCGCCGGTGCGGTTCTGACCAGCAGCGGTATGTCAGCCATT
CATCTGGTGTGTACGGTCTTTCTGAAACCTGGCGATTTACTGGTTGCGCCGCACGACTGCTACGGCGGCAGTTACCGTTT
GTTCGACAGCCTGAGCAAACGTGGCGCGTATCGCGTGCTGTTTGTGGATCAGGGTGATCCACAGGCGCTGGCCGATGCGC
TGAAAGAAAAGCCGAAGCTGGTGCTGATTGAAACGCCGAGCAATCCTTTGCTGCGTGTGGTGGATATTCAGGCGATTTGC
GACGCGTCCCGCGCCGCCGGTGCCCTGACAGTGGTGGACAACACCTTCCTGAGTCCGGCGTTGCAAAATCCATTGCAGCT
TGGTGCGGATTTAGTCGTCCATTCATGTACTAAATATCTGAACGGGCATTCTGATGTGGTCGCCGGTACGGTAATATCTA
AGACCGCAGAACATGCGACAGAACTCGCCTGGTGGGCGAACAACATTGGCGTTACCGCTGCGGCCTTTGACAGCTATCTG
TTATTGCGCGGTTTGCGCACGTTAACGGTTCGCGTGAAACAGCAACAGGAAAATGCACTGGCAATTGTTGCTTATTTACA
AAAACAATTGCAGGTCAAAAAGCTGTATCATCCGTCGCTGCCGGAAAACCAGGGACATGAAATTGCCTGCCGCCAGCAAC
GTGGCTTTGGTGCCATGATCAGTTTTGAATTTAACGGAGATGAAGCTCAGTTGCGCCATTTCCTGAAAGAATTGAAGTTA
TTTACCCTCGCAGAATCACTGGGAGGCGTCGAAAGCCTGATTTCTCATACCGCGACCATGACACATGCTGGCATGGCGCC
GGAAGCGCGCAAAGCCGCCGGGATTTCTGACAGCTTGCTCCGTATTTCTGTAGGTCTTGAAGACAGCGAAGATTTGATTG
CTGATCTGGAAAATGCATTCCAGTCAGTGGCAACGAGGTAA

Protein sequence :
MTHKQATIAVGSGLNNDQQYGCVVPPIYLSSTYNFEDFNQPRAHDYSRRGNPSRDVVQRALADLEGGAGAVLTSSGMSAI
HLVCTVFLKPGDLLVAPHDCYGGSYRLFDSLSKRGAYRVLFVDQGDPQALADALKEKPKLVLIETPSNPLLRVVDIQAIC
DASRAAGALTVVDNTFLSPALQNPLQLGADLVVHSCTKYLNGHSDVVAGTVISKTAEHATELAWWANNIGVTAAAFDSYL
LLRGLRTLTVRVKQQQENALAIVAYLQKQLQVKKLYHPSLPENQGHEIACRQQRGFGAMISFEFNGDEAQLRHFLKELKL
FTLAESLGGVESLISHTATMTHAGMAPEARKAAGISDSLLRISVGLEDSEDLIADLENAFQSVATR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 4e-57 42
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-58 42