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Name : Rahaq_4285 (Rahaq_4285) Accession : YP_004214998.1 Strain : Rahnella sp. Y9602 Genome accession: NC_015061 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 4684430 - 4685260 bp Length : 831 bp Strand : + Note : PFAM: Integrase catalytic region; KEGG: enc:ECL_A124 IS3 family transposase orfB DNA sequence : ATGTTGATGTGTGATGCGACCGGTCTGTCGCAACGTCGTGCCTGCAGGCTTAAAGGTTTGTCCCTGTCGACCTGCCGTTA TGATGCTCAGCGTCCGGCTGCTGATGCACATTTATCAGGGCGTATTACTGAGCTGGCGCTTGAACGCAGACGTTTTGGTT ATCGGCGTATCTGGCAGTTGCTGCGTAGGGAGGGCCTTCACGTCAATCACAAGCGGGTATACCGTATTTACCACCTTAAT GGACTGAGCGTAAAACGCAGACGACGCCGTAAAGGGCTGGCGACCGAACGGTTTCCGCTTCTTCGCCCGGATGCGCCGAA CCTTACATGGTCGATGGATTTCGTTATGGACGCACTGGTCAACGGTCGCAGGATCAAGTGCCTGACCTGTGTGGATGATT TCACGAAGGAGTGTCTGACGATCACCGCTGCTTTCGGTATTTCAGGCGTTCAGGTCACGCGTATTCTGGACAGCATCGCG TTGTTTCGGGGCTATCCGGCGACAATAAGAACCGATCAGGGCCCGGAATTTACCTGCCGCGCGCTCGATCAATGGGCCTT TGAGCATGGTGTGGAACTACGGCTTATCCAGCCAGGTAAGCCAACGCAGAACGGATTTATTGAGAGTTTTAACGGACGCT TTCGCGATGAGTGTCTGAACGAACACTGGTTCAGCGATATCGTTCACGCCAGGAAAACCATTAACGACTGGAGGCAGGAT TATAACGAGTGTCGTCCACATTCGGCACTGAATTATCTGACGCCATCAGAGTTTGCAGCACGGTGGCGAAATGGAAAATG TGAAGGTAAACAAACCGACATTACTAACTGA Protein sequence : MLMCDATGLSQRRACRLKGLSLSTCRYDAQRPAADAHLSGRITELALERRRFGYRRIWQLLRREGLHVNHKRVYRIYHLN GLSVKRRRRRKGLATERFPLLRPDAPNLTWSMDFVMDALVNGRRIKCLTCVDDFTKECLTITAAFGISGVQVTRILDSIA LFRGYPATIRTDQGPEFTCRALDQWAFEHGVELRLIQPGKPTQNGFIESFNGRFRDECLNEHWFSDIVHARKTINDWRQD YNECRPHSALNYLTPSEFAARWRNGKCEGKQTDITN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13352.1 | insertion sequence IS407 OrfB | Not tested | PAGI-5 | Protein | 7e-64 | 65 |
| unnamed | ABR13540.1 | insertion sequence IS407 OrfB | Not tested | PAGI-8 | Protein | 7e-80 | 62 |
| EXB25 | ABD94712.1 | hypothetical protein | Not tested | ExoU island B | Protein | 1e-46 | 60 |
| XCV0439 | YP_362170.1 | ISRSO12 transposase (fragment) | Not tested | Hrp PAI | Protein | 3e-39 | 45 |
| trp1400B | CAB46580.1 | IS1400 transposase B | Not tested | HPI | Protein | 3e-43 | 44 |
