|
Name : Rahaq_4126 (Rahaq_4126) Accession : YP_004214841.1 Strain : Rahnella sp. Y9602 Genome accession: NC_015061 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 4497787 - 4499751 bp Length : 1965 bp Strand : + Note : KEGG: eca:ECA0232 thiamine biosynthesis protein ThiC; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC DNA sequence : ATGTCGAGTACCCAAAAACCCGTTATTTCTGAAAAGAAACCGTCAAATCGCCGTGAACAACGCGCGCAGGCACAATCGTT TATCGACAGCTTGCAGGGCGAAGCTTTCCCCAACTCCCGGCGTATTTATCTTGAAGCTGACCGCGAAGATATCCGCGTGC CGATGCGTGAAATCCAGCTCAGCCCGACGCTGGTCGGCGGCGGCAAAGACAATCCGCAGTTCGAAGAAAACGAAGCAATT CCTGTTTACGACACCGCCGGACCTTACGGTGATCCGGCGGCAGTTATCGACGTGCATACCGGTCTGGGAAAATTACGCGC CCGCTGGATAAACGAGCGTGCGGACACGCAGGAACTTTCACAGGTCAGTTCCGGTTTTACTCAGCAGCGGCTGGCGGATG ACGGGCTGGACCACCTCCGCTTCGAACACCTGCCGCGCCCGCGCAAAGCCATTGCGGGTAAAAATGTCACGCAACTGCAT TACGCCCGCAAAGGCATCATCACACCTGAGATGGAATTTATCGCCATTCGCGAAAATATGGGGCGTGAACGGATCCGCGG CGAGGTTCTGCGCCAGCAACATCCCGGCGAAAGCTTTGGCGCGCATCTGCCCGCCAGTATCACTGCAGAGTTTGTGCGAC AGGAAGTGGCAGCCGGGCGCGCGATTATTCCCGCCAACATTAACCACCCTGAATCAGAGCCGATGATCATCGGGCGTAAT TTCCTGGTGAAAGTGAACGCTAATATCGGCAACTCGGCGGTGACATCTTCCATCGAAGAAGAAGTGGAGAAACTGGTGTG GTCGACACGCTGGGGCGCGGACACCGTAATGGATCTCTCCACCGGACGTTATATACATGAAACCCGTGAATGGATCCTGC GTAACAGTCCGGTACCGATCGGCACCGTGCCGATTTATCAGGCCCTGGAAAAAGTGAACGGTGTGGCCGAAGATCTGAAC TGGGAAATATTCCGCGATACATTGCTTGAACAGGCCGAGCAAGGCGTCGATTACTTCACCATTCACGCCGGTGTGTTGCT GCGTTATGTGCCGATGACCGCCAAACGCCTGACCGGGATCGTGTCGCGCGGCGGTTCGATCATGGCGAAATGGTGTCTGT CACATCATCGCGAAAGCTTCCTGTTTGAGCATTTCCGCGAGATCTGTGAAATCTGCGCCGCCTATGATGTCTCGCTTTCA TTGGGCGACGGCCTGCGTCCGGGTTCGATTCAGGATGCCAATGACGAAGCACAATTCGCCGAATTACGCACGCTGGGCGA ACTGACCAAAATTGCCTGGGAATACGATGTTCAGGTGATGATCGAAGGTCCGGGACATGTGCCGATGCAGATGATCCGCC GCAACATGACCGAAGAACTCGAGCAGTGTCACGAAGCCCCGTTCTATACCCTTGGTCCGCTGACTACCGATATCGCGCCG GGTTACGATCACTTTACGTCCGGTATTGGCGCCGCGATGATTGGCTGGTTTGGCTGCGCCATGCTCTGTTATGTCACGCC GAAAGAGCATCTGGGCCTGCCGAACAAAGAAGACGTTAAGCAGGGTTTGATTACCTACAAAATCGCAGCACACGCTGCCG ATTTAGCCAAAGGCCATCCGGGTGCCCAAATCCGCGATAACGCCATGTCAAAAGCGCGTTTCGAATTCCGCTGGGAAGAT CAGTTTAATCTGGCTCTCGATCCGGCAACGGCACGCGCCTACCACGATGAAACGCTGCCGCAGGAATCCGGCAAAGTTGC ACACTTCTGCTCGATGTGTGGCCCGAAATTCTGCTCGATGAAAATCACTCAGGAAGTTCGCGATTACGCCGCTGCGCTTG AAGCCAAAGCCCAGCCAATAGAACTCGTTGAATCCGGTATGGCGCAGATGTCTGCCGAATTCCGTTCGCGCGGCGGTGAG CTTTATCACCCGGCCGATAACCTCAGTTCGGAGAGCAGCAAATGA Protein sequence : MSSTQKPVISEKKPSNRREQRAQAQSFIDSLQGEAFPNSRRIYLEADREDIRVPMREIQLSPTLVGGGKDNPQFEENEAI PVYDTAGPYGDPAAVIDVHTGLGKLRARWINERADTQELSQVSSGFTQQRLADDGLDHLRFEHLPRPRKAIAGKNVTQLH YARKGIITPEMEFIAIRENMGRERIRGEVLRQQHPGESFGAHLPASITAEFVRQEVAAGRAIIPANINHPESEPMIIGRN FLVKVNANIGNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWILRNSPVPIGTVPIYQALEKVNGVAEDLN WEIFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTAKRLTGIVSRGGSIMAKWCLSHHRESFLFEHFREICEICAAYDVSLS LGDGLRPGSIQDANDEAQFAELRTLGELTKIAWEYDVQVMIEGPGHVPMQMIRRNMTEELEQCHEAPFYTLGPLTTDIAP GYDHFTSGIGAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHPGAQIRDNAMSKARFEFRWED QFNLALDPATARAYHDETLPQESGKVAHFCSMCGPKFCSMKITQEVRDYAAALEAKAQPIELVESGMAQMSAEFRSRGGE LYHPADNLSSESSK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 72 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 72 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 70 |
