Gene Information

Name : Rahaq_3889 (Rahaq_3889)
Accession : YP_004214605.1
Strain : Rahnella sp. Y9602
Genome accession: NC_015061
Putative virulence/resistance : Unknown
Product : ornithine carbamoyltransferase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0078
EC number : 2.1.3.3
Position : 4245116 - 4246123 bp
Length : 1008 bp
Strand : +
Note : TIGRFAM: ornithine carbamoyltransferase; KEGG: ctu:Ctu_04900 ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain

DNA sequence :
ATGACTACCACATTGAAAAACCGTCATTTTCTTAAACTTCTTGATTTCACACCGGAAGAAATTCAGCAACTGATCACCCT
GGCGCTGACGCTTAAAGACGATAAGCAAACGGGTCAGGAACGCCCTTGTCTGCGTGGAAAAAATATCGCGCTGATTTTTG
AGAAAACCTCTACCCGCACCCGCTGTGCGTTTGAAGTCGCCGCGTTTGATCAGGGCGCACACGTGACTTATCTCGGCCCT
GGCGGCAGCCAGATCGGACACAAGGAATCCATGAAAGACACCGCCCGCGTGCTGGGGCGAATGTATGACGGCATCGAATA
CCGGGGTTTTGCACAAAAGACGGTGGAAGAACTGGCGGAATTCTCCGGCGTACCGGTGTGGAACGGGCTGACCGACGAGT
TTCATCCGACCCAAATCCTTGCCGACCTGATGACCATGCTTGAACACTCGCCGGGTAAAAAACTCAGTCAGATCAGCTTC
GCTTATCTGGGCGATGCCCGAAATAATATGGGTAATTCCCTGATGGTCGGGGCCGCAAAAATGGGAATGGATATCCGTCT
GATCGCGCCAAAATCCTTCTGGCCGGAAGAGACACTGGTCGCGACCTGCTGCGATATCGCCCGCACTACCGGCGCAAGGA
TCCTGCTGACAGAGCACGTTGATGAAGGCGTACAGGGCGTCGATTTTCTTTACACCGATGTCTGGGTGTCAATGGGCGAA
GCCAAAACCGCCTGGGCAGAACGTATCAGTCTGATGACCCCGTATCAGGTTAATGCGGCGGTGCTTAACGCTACCGGCAA
TCCTGACGTCAAATTCATGCACTGCCTGCCCGCCTTCCATAACGAAGAAACCACCCTCGGCAAAGAACTGGAAATCGCTT
ACGGCATGAAAGGGCTGGAAGTGACGGATGACGTTTTTGAGTCTCCGCATTCCATCGTTTTTGATGAAGCCGAAAACCGT
ATGCACACCATAAAAGCGGTCATGGTCGCCACCCTTGGCGATGACTAA

Protein sequence :
MTTTLKNRHFLKLLDFTPEEIQQLITLALTLKDDKQTGQERPCLRGKNIALIFEKTSTRTRCAFEVAAFDQGAHVTYLGP
GGSQIGHKESMKDTARVLGRMYDGIEYRGFAQKTVEELAEFSGVPVWNGLTDEFHPTQILADLMTMLEHSPGKKLSQISF
AYLGDARNNMGNSLMVGAAKMGMDIRLIAPKSFWPEETLVATCCDIARTTGARILLTEHVDEGVQGVDFLYTDVWVSMGE
AKTAWAERISLMTPYQVNAAVLNATGNPDVKFMHCLPAFHNEETTLGKELEIAYGMKGLEVTDDVFESPHSIVFDEAENR
MHTIKAVMVATLGDD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
argF NP_374285.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 1e-98 61
argF NP_645867.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 6e-99 61
arcB1 YP_186044.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 5e-99 61
argF YP_493760.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 5e-99 61
argF NP_371693.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 1e-98 61
SAKOR_01090 YP_008491278.1 Ornithine carbamoyltransferase Not tested vSa¥ã Protein 7e-99 61
SE0103 NP_763658.1 ornithine carbamoyltransferase Not tested SCCpbp4 Protein 3e-98 60