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Name : Rahaq_3873 (Rahaq_3873) Accession : YP_004214589.1 Strain : Rahnella sp. Y9602 Genome accession: NC_015061 Putative virulence/resistance : Virulence Product : fimbrial biogenesis outer membrane usher protein Function : - COG functional category : N : Cell motility COG ID : COG3188 EC number : - Position : 4225992 - 4228607 bp Length : 2616 bp Strand : - Note : PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: kpu:KP1_0600 long polar fimbrial outer membrane usher protein DNA sequence : ATGCAGGACGAAAAAGGATTTTCTGCAAGGAAAAAACAACACTCTTTTTTTTTCGGGACTGTTAATCATTGCGGAGTACA GCAGATATTCAAACTAAAAAGTCTGCCCTTATTAATTTTATTGGCATTTAATTATAATTCTTTTGCAGCAGAAGAATTTA GTGCGGAAATGCTCAAAGCTGTCGGCAACGGCGGTAACATGGATGGCGTCGATCTTAATTATTTTGCCAATGAAGGTGGG CAAGCACCTGGCACTTATTCTGTGGATGTCTTCCTGAATAATGAGTTAATTGAAAGACGCTCTGTTATCTTCGTTGATGT TCCTGATTCACCGGGGAAGATTTTCGGTAAAGTGACGCCTGCGCAACTCTATGAGTATGGTGTAAAAGACGACGTTTTCC CGGCATTAAAAACGCAATCTCCAGGTCAGACGCTGGAAAAACCGCTGGTAACCTATATACCAGACGCCACAGAAAAACTC GATCTGGCAGGGGGGAAGTATTACATTACTGTCCCTCAAATCGGCGTTCGGCCACATATCCGAAATGCTGTAGATCCCTC TCTTTGGGATGACGGTATCCCTGCGTTAATGGTGAACTATAACTATTCCGGCTCCGATACTGACGATGAGATCAGCGGTG ACTCGCAATCTAACTATTTGAACCTGCGTAGCGGAATTAACCTTGGTGCATGGCGTTTACGTAATTATTCAACCTATGCT GATAATACCAATGATGATGGCGATAAAACGCAATCATGGGATTCAATTCAAACCTATTTGCAACGCGATGTGCGTTTCCT GCAGGGCGGGCAACTGACGCTCGGTGAATACTCCTCGCCGGGTGAAGTTTTCGACAGTGTCCAGTTCACTGGTGCGCAAT TATCTTCTGATGACAATATGCTGCCGGACCGTTTACGCCAGTATGCGCCGATAATTCGCGGTATCGCGCGCAGTAACGCT CAGGTGACTATCGAGCAGGATGGCTACACCATCTATCAAACGAACGTGGCACCTGGACCGTTTTCGATTACTGACCTCTA TCCCTCCAGTAACGGTGGGGATATGAAAGTAACAATCAAAGAGGCCGATGGGTCGACAACGCAATACACTCAGGCCACCA GTTCAGTGCCAATCCTGCAACGTGAAGGGCGTCTGAAATACAGCGCCACGGCAGGTCGCTATCGTTCTGGCGTGGAAGAT GTAGAAGAGCCTTATTTTGGCCAGTTGACCGCAATTTATGGTCTTTCGTCAAACATCACTGCCTATGGTGGCACACAGTT TGCCGATAATTATAAGGCCGCATCGGCGGGCCTGGGTATGGATATGGGCCGAATTGGTGCGTTGTCTTTAGACGTCACCC ATGCAGTCAGTACCCTTGAGGGTATCGGTGATAAGACCGGGCAATCCTACCGCCTCATGTATGCGAAAAATATCGATCAA ACCGATACCAACTTGCAACTTGCTGGTTATCGTTATTCCACCAAAGGATATTATTCCTTTGACGATGTGCAGAAATTTAG CGCAGAAACGGAAGACGGGCTGGACGAGTTTAATCGTACCCATAATGCTCGCAGTAAAATTCAGGCCAGCATTAATCAGA ATATCGCCGACCTTGCTACGATTTATTTTAGCGCCAGTGAACAAGATTATTGGGGAGGCGATGGCAAAGAACTGTCATTA CAAACCGGATTAACCAGCTCATTTAAAGGTATGACTTACGGCCTGAATTATAGTTATACCAAAAACCCGGGTATTGATGA ATCCGATCAGGTTCTGGCATTTAATATGTCTATTCCGTTCAGCGCATTCATGAATTCATCTCAGGCCTGGGCAAGTTATA ATATGACTTCGCGTAAAGATGGTTCAACAACACAGCAAGCGGGTGTTAATGGAACATTACTTGAAAATAATAACCTTAGT TATAGCGTTCAACAAGGTTATGAAAATAAAGGCGGCGGTGCCTCAGGGTCTTCCTCATTAGATTATAAAGGTTCATCCGG TGAAGCGCTGGTGGGGTATAGCTATACCGATCAAAATAAACAAATGACCTATGGCCTGTCAGGTGGCGTATTAGTACATG AAAATGGTGTAACGCTTTCTCAATATATGGGCGACAGTGTGACGCTTGTTAAAGCACCTGGGGCATCTGATGTTTACATT GAAAACAGTACGGGTGTGAGTACCGACTGGCGTGGTTATGCTGTCGTACCTTACGCTCAGCCGTACAAGAAAAATGAAGT GAGGCTAAGAACCGAAAGTATGGGTTCGAAACTGGATATTGCAGAACCTTCATTAACCGTTATACCGACCAAGGGCGCAG TCGTCTTGGCGAAATATAATGCCAAAGTAGGCGATCGTGCGTTAATTACGATGACTTACGCAGGTGCACCATTGCCGTTC GGTACTGTAGTTTCTGTCATGGACAGCGAAACAGACAATACAGGCATTGTTGGTGAGAACGGCGAGGTCTATCTGACCGG GCTGGCAGCACAAGGGCGCTTGTTGGCGAAATGGGGTAATGGCACAGAGAAGCAATGCTATGCCAGTTATCAACTCGCGA GCACCCCGGAAACTGCTGAAGATTTGATCAAGCAAGCCTCTGCACAATGCAAATAA Protein sequence : MQDEKGFSARKKQHSFFFGTVNHCGVQQIFKLKSLPLLILLAFNYNSFAAEEFSAEMLKAVGNGGNMDGVDLNYFANEGG QAPGTYSVDVFLNNELIERRSVIFVDVPDSPGKIFGKVTPAQLYEYGVKDDVFPALKTQSPGQTLEKPLVTYIPDATEKL DLAGGKYYITVPQIGVRPHIRNAVDPSLWDDGIPALMVNYNYSGSDTDDEISGDSQSNYLNLRSGINLGAWRLRNYSTYA DNTNDDGDKTQSWDSIQTYLQRDVRFLQGGQLTLGEYSSPGEVFDSVQFTGAQLSSDDNMLPDRLRQYAPIIRGIARSNA QVTIEQDGYTIYQTNVAPGPFSITDLYPSSNGGDMKVTIKEADGSTTQYTQATSSVPILQREGRLKYSATAGRYRSGVED VEEPYFGQLTAIYGLSSNITAYGGTQFADNYKAASAGLGMDMGRIGALSLDVTHAVSTLEGIGDKTGQSYRLMYAKNIDQ TDTNLQLAGYRYSTKGYYSFDDVQKFSAETEDGLDEFNRTHNARSKIQASINQNIADLATIYFSASEQDYWGGDGKELSL QTGLTSSFKGMTYGLNYSYTKNPGIDESDQVLAFNMSIPFSAFMNSSQAWASYNMTSRKDGSTTQQAGVNGTLLENNNLS YSVQQGYENKGGGASGSSSLDYKGSSGEALVGYSYTDQNKQMTYGLSGGVLVHENGVTLSQYMGDSVTLVKAPGASDVYI ENSTGVSTDWRGYAVVPYAQPYKKNEVRLRTESMGSKLDIAEPSLTVIPTKGAVVLAKYNAKVGDRALITMTYAGAPLPF GTVVSVMDSETDNTGIVGENGEVYLTGLAAQGRLLAKWGNGTEKQCYASYQLASTPETAEDLIKQASAQCK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fim2D | AFH78429.1 | putative fimbrial usher protein | Virulence | KpGI-5 | Protein | 1e-154 | 43 |
| sfaF | CAC16953.2 | SfaF protein | Virulence | PAI III 536 | Protein | 1e-152 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Rahaq_3873 | YP_004214589.1 | fimbrial biogenesis outer membrane usher protein | VFG0876 | Protein | 2e-160 | 45 |
| Rahaq_3873 | YP_004214589.1 | fimbrial biogenesis outer membrane usher protein | VFG0454 | Protein | 4e-165 | 43 |
| Rahaq_3873 | YP_004214589.1 | fimbrial biogenesis outer membrane usher protein | VFG1645 | Protein | 6e-153 | 42 |
| Rahaq_3873 | YP_004214589.1 | fimbrial biogenesis outer membrane usher protein | VFG0912 | Protein | 3e-153 | 42 |
