Gene Information

Name : Rahaq_3656 (Rahaq_3656)
Accession : YP_004214373.1
Strain : Rahnella sp. Y9602
Genome accession: NC_015061
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 3962445 - 3963257 bp
Length : 813 bp
Strand : -
Note : KEGG: ypb:YPTS_0771 iron-hydroxamate transporter ATP-binding subunit; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGCCTGATAACAACGTACATCCGTCTTCCCCGCTGCCAGACAGCGTCTTCCGTCTGCAGGACGTAAGTTTCAGCGTCCC
GGGACGCACGCTTCTCGCGCCATTATCCCTGACCTTTGCGCAGGGGAAAGTGTGTGGCCTGATTGGTCACAACGGGTCAG
GAAAGTCGACGTTATTAAAAATGCTCGGGCGGCATCAGGCGGCGACATCCGGAACGATTTACCTCAATGACACGCCGCTG
GCGCAGTGGGACAGCAAAGCCTTTGCGCGTCAGGTTGCCTATTTGCCGCAGCAGCTCCCCGCCGCAGAAGGCATGACCGT
GCAGGAACTGGTGGCGATTGGCCGCTATCCGTGGCACGGCGCACTGGGTCGTTTCAAACATCAGGATAAAGAAAAGGTCG
AAGAAGCCATTGCGCTGGTCGGCCTCAAACCGTTCGCCCGGCGTCTGGTGGACAGCCTCTCCGGCGGCGAACGTCAGCGT
GCCTGGCTGGCGATGATGGTGGCGCAGGACAGCCGTTGCCTGCTGCTCGATGAACCGACCTCTGCGCTGGATATCGCCCA
TCAGAAAGATGTGCTGGCCTTGATCCAGCGTCTGAGCCGTGAGAAGGGCTTAACCGTGATCGCCGTGCTGCATGATCTGA
ACATGGCTGCCCGCTATTGCGATCAACTGATGGCGCTGCGCGGTGGTGAAATGATTGCCCAGGGCGCGCCGGAAGAGATG
ATGCGCGGCGAGGTACTGGAACAGATTTATGGCATTCCGATGGGTATTCTGCCGCATCCTGCGGGTGGTGCGCCGGTGAG
CTTCGTATACTGA

Protein sequence : 
MPDNNVHPSSPLPDSVFRLQDVSFSVPGRTLLAPLSLTFAQGKVCGLIGHNGSGKSTLLKMLGRHQAATSGTIYLNDTPL
AQWDSKAFARQVAYLPQQLPAAEGMTVQELVAIGRYPWHGALGRFKHQDKEKVEEAIALVGLKPFARRLVDSLSGGERQR
AWLAMMVAQDSRCLLLDEPTSALDIAHQKDVLALIQRLSREKGLTVIAVLHDLNMAARYCDQLMALRGGEMIAQGAPEEM
MRGEVLEQIYGIPMGILPHPAGGAPVSFVY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-45 44
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 6e-43 42
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 9e-43 41
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 6e-42 41
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 6e-42 41
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 7e-42 41
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-42 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rahaq_3656 YP_004214373.1 ABC transporter BAC0164 Protein 8e-46 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rahaq_3656 YP_004214373.1 ABC transporter VFG1042 Protein 8e-46 44
Rahaq_3656 YP_004214373.1 ABC transporter VFG0925 Protein 5e-46 43