Gene Information

Name : Rahaq_3598 (Rahaq_3598)
Accession : YP_004214315.1
Strain : Rahnella sp. Y9602
Genome accession: NC_015061
Putative virulence/resistance : Unknown
Product : polysaccharide export protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1596
EC number : -
Position : 3897283 - 3898425 bp
Length : 1143 bp
Strand : -
Note : PFAM: polysaccharide export protein; Soluble ligand binding domain; KEGG: kpu:KP1_3720 capsule polysaccharide export protein precursor

DNA sequence : 
ATGGATTTTATGAAAAATAAAACGTTTAAGATTTCTGCATTATTCGGGGCTTTGTTACTGAGCGGATGTACGGTTATTCC
AGGGCAGTCGTTAAGTACCACGGACAAAGATGTTGTTCAACCTACTGATAGCAATTATGACATTGATAAATTAGTTAACG
TGTACCCGATGACGCCCGGCCTGATCGATCAGCTGCGCCCTGACAGCGTTCAGGCACGGCCAAATCCTCAGCTGGATATA
CAACTGCAAAACTACCAATACCGTATTGGGGTTGGTGATGTGCTGATGGTTACCGTCTGGGATCACCCGGAACTGACCAC
CCCGGCAGGTCAGTACCGCAGTGCCAGTGACACGGGCAACTGGGTTAACGCCGACGGGACAATTTTCTATCCTTATATCG
GGAAACTGAAGGTCACTGGAAAAACTGTCAGTGAAGTACGTCAGGAGATCAGCAGCCGTCTGGCAACGTACATTGAAAGT
CCGCAGGTTGACGTCAGCATTGCGGCATTTCGTTCGCAGAAAATTTATACTACTGGCGAAGTCGTCAAGTCCGGACAACA
GCCCATTACCAATATTCCGCTTACCGTGATTGATGCTATTAATGCTGCAGGGGGCTTAGCGCCTGATGCAGACTGGCGTA
ACGTCGTGCTCAACCATAACGGCCGGGATACTCAGATTTCACTTCAGGCCCTGATGCAGAAAGGGGACCTCACACAGAAC
CGCTTGCTTTATCCCGGCGATATTCTGTTTGTACCACGAAATGACGACCTCAAAGTATTTGTGATGGGCGAGGTCACCAA
GCAGAGCACGCTGAAAATGGACCGTAGCGGGATGACGCTCGCCGAGGCATTAGGCAATTCAGAAGGGATTGCCCAAAGTA
TGGCGGATGCATCCGGGATATTTGTTATCCGGCCACTGAAGGGAAGCCAGAAAGGCAAAATTGCTAATATTTATCAGCTG
AATGCCAAAGATGCTTCTTCTATGGTGATGAGTACGGAATTCCAGCTTCAGCCTTACGATATCGTTTATGTCACCACCGC
ACCGATAGTTCGCTGGAATCGTGTTATTTCGCAGATTGTCCCGACCATTTCGGGAGTGCATGACATGATCGAAGCTACTC
GTTACATCAAGCAGTGGAACTAA

Protein sequence : 
MDFMKNKTFKISALFGALLLSGCTVIPGQSLSTTDKDVVQPTDSNYDIDKLVNVYPMTPGLIDQLRPDSVQARPNPQLDI
QLQNYQYRIGVGDVLMVTVWDHPELTTPAGQYRSASDTGNWVNADGTIFYPYIGKLKVTGKTVSEVRQEISSRLATYIES
PQVDVSIAAFRSQKIYTTGEVVKSGQQPITNIPLTVIDAINAAGGLAPDADWRNVVLNHNGRDTQISLQALMQKGDLTQN
RLLYPGDILFVPRNDDLKVFVMGEVTKQSTLKMDRSGMTLAEALGNSEGIAQSMADASGIFVIRPLKGSQKGKIANIYQL
NAKDASSMVMSTEFQLQPYDIVYVTTAPIVRWNRVISQIVPTISGVHDMIEATRYIKQWN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf39 AAO18064.1 Orf39 Not tested TTSS locus Protein 2e-135 70