Gene Information

Name : Rahaq_3568 (Rahaq_3568)
Accession : YP_004214287.1
Strain : Rahnella sp. Y9602
Genome accession: NC_015061
Putative virulence/resistance : Unknown
Product : polysaccharide export protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1596
EC number : -
Position : 3855601 - 3856731 bp
Length : 1131 bp
Strand : -
Note : KEGG: kva:Kvar_1551 polysaccharide export protein; manually curated; PFAM: polysaccharide export protein; Soluble ligand binding domain

DNA sequence : 
ATGAAAGTTAAGATTGTTACTATTCCACTCATCATATTTGTAGTATCGCTTTGTGGATGTTCGTTATCGCCTGGTATCGG
TATAAGTACTTCGGGTAAAAATGTCGTGGAAGAAAACGGCCCTTATCAGGATATTAATGCAATGGTCGATATTTATCCCA
TCACGCCTAAACTGGTGGAGTCACTTGTTCGTCACCCTGCCATTGCGACAGTCAACAGCGACCTTGATTCACGTGTTAAC
AAGTACCAGTACTATGTTGGCATCGGCGATATATTAACAATTACGGTATGGGATCATCCTGAACTGACGACACCTGCCGG
TCAGTATCGAAGTGCCGGCGATGCCGGGAACTGGGTTAACGCCGAAGGTGCCATATTTTACCCTTACATAGGGATGGTCA
ACGTGGCAGGCAAAACGACCTCTGAAATTCGTCGTGATATTACCGCCAGGCTCACCCGATATATTCAATCGCCGCAGGTC
GATGTCAATGTTGCGACGTTCCGCTCGCAGAAAGTCTATGTCACCGGTGAGGTGGAAAAATCCGGTCAGTTACCTGTCAC
TAACGTTCCCATGACCATCATGGACGCAATTAATCTGGCGGGGGGATTAAGTGAAAATGCGGACTGGAATAATATCGTGT
TGTCGCATAATGGCGAGAAATCTCTCATTTCACTGCAGTCTTTAATGAAGCATGGAGATATGCGGCAGAACCGTTTGCTT
GAGCCGGGAGATATCCTGTATGTCCCGAGAAACGACGAGCTGAAAGTGTTCGTGATGGGCGAAGTGAAAAAGCAAACGAC
ACTTCGCATGGATCGTAGCGGCATGACACTGACCGAAGCCCTCTCTAATGCCGAAGGCATGGATCCGTTAACGTCGGATG
CCACAGGGGTATTTGTCATCAGAACCCTGAAAGGGGATGCTAAAAAGAAAATAGCGAACATCTACCAGTTGAATGCAAGC
GATGCTACGGCACTGGTGCTGGGAACCGAATTCCAGCTTGAGCCTTACGATATTGTTTATGTGACGACAGCTCCGCTGGC
TAAATGGAACCGTATTATCGGACAATTATTGCCAACCATTACCGGGGTTCATGATCTGACGGAAACTGCCCGTTATATTC
GAAACTGGTAA

Protein sequence : 
MKVKIVTIPLIIFVVSLCGCSLSPGIGISTSGKNVVEENGPYQDINAMVDIYPITPKLVESLVRHPAIATVNSDLDSRVN
KYQYYVGIGDILTITVWDHPELTTPAGQYRSAGDAGNWVNAEGAIFYPYIGMVNVAGKTTSEIRRDITARLTRYIQSPQV
DVNVATFRSQKVYVTGEVEKSGQLPVTNVPMTIMDAINLAGGLSENADWNNIVLSHNGEKSLISLQSLMKHGDMRQNRLL
EPGDILYVPRNDELKVFVMGEVKKQTTLRMDRSGMTLTEALSNAEGMDPLTSDATGVFVIRTLKGDAKKKIANIYQLNAS
DATALVLGTEFQLEPYDIVYVTTAPLAKWNRIIGQLLPTITGVHDLTETARYIRNW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf39 AAO18064.1 Orf39 Not tested TTSS locus Protein 6e-122 62