Gene Information

Name : Rahaq_3488 (Rahaq_3488)
Accession : YP_004214207.1
Strain : Rahnella sp. Y9602
Genome accession: NC_015061
Putative virulence/resistance : Virulence
Product : PfkB domain-containing protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0524
EC number : -
Position : 3766939 - 3767871 bp
Length : 933 bp
Strand : -
Note : PFAM: PfkB domain protein; KEGG: pwa:Pecwa_3718 ribokinase

DNA sequence :
ATGAACAAAGGCAAGGTATGCGTATTTGGGTCTTTCAACCTCGATATCGTCGCAGGCATGGCGCGTTTCCCCAAACCGGG
GGAATCCCTGATTGCCCGCAACAGCATGATGGGCGCGGGCGGTAAGGGCGCCAATCAGGCGGTCGCCGCACTGCGTGCCG
GTGCGCGGGTGCATTACATCGGTAAAGTTGGTCGCGATGATTTCGGCATGTTTGCCCGCCGCCATCTCGACAGCGCCGGT
TTCGATGCCGTCACGTTGTTTTCCACCAGCGAATGCCCGACCGGCAACGCGCTGATTTATGTCGCCGGAGCCGATGCCGA
AAACATGATTGCCGTTGATCCGGGCGCCAACCTGACGGTCACCGACGAAGAAGTCGAACAATGCCGTCCGGCCGTCGCCG
CCGCTGATATCCTGCTGACGCAGCTCGAAAATAATCTGCCTGCGATTGAAAAACTGATCGGCATCGCGAAGGAAAATGAC
ACCTACATTATCCTCAACCCCGCGCCGTTCCAGCCGGTGTCCGACCATCTGCTGTCGCAGGTCGATTTACTGACGCCGAA
CGCCACGGAGTGCACGCTGCTGACCGGCATTGAAGTCCGCGATATTCCCTCTGCCCAACGCGCCGCCCACGCGCTGCACG
CCAAAGGAATACAGGCGCTGATCATCACACTGGGCACGCAGGGCGCATTGCTTTCAGTCAACGGCGAAACGCAGATTATC
CATGCCTGTCCGGCGATCCCGGTGGATACCACTGGTGCAGGTGACGCCTTTAACGGCGCGCTGGCCTCCCAACTCGCCGC
CGGCGCCACACTCCGTGAAGCCGCACAATTCGCATCTGCTTATGCTTCTGTATGTGTGGAACGCGCAGGCGCAGCCGCAT
CAATGCCGACGTATGAAGAAGCACATGAAAGAATGGGGGTTGTGGTGGTTTGA

Protein sequence :
MNKGKVCVFGSFNLDIVAGMARFPKPGESLIARNSMMGAGGKGANQAVAALRAGARVHYIGKVGRDDFGMFARRHLDSAG
FDAVTLFSTSECPTGNALIYVAGADAENMIAVDPGANLTVTDEEVEQCRPAVAAADILLTQLENNLPAIEKLIGIAKEND
TYIILNPAPFQPVSDHLLSQVDLLTPNATECTLLTGIEVRDIPSAQRAAHALHAKGIQALIITLGTQGALLSVNGETQII
HACPAIPVDTTGAGDAFNGALASQLAAGATLREAAQFASAYASVCVERAGAAASMPTYEEAHERMGVVVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rbsk YP_216390.1 DeoR family transcriptional regulator Not tested SPI-2 Protein 8e-52 46
orf408 NP_460347.1 regulatory protein Not tested SPI-2 Protein 2e-51 45
ORF 408 CAB37417.1 - Not tested SPI-2 Protein 2e-51 45
APECO1_1076 YP_853096.1 carbohydrate kinase Not tested PAI IV APEC-O1 Protein 6e-49 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rahaq_3488 YP_004214207.1 PfkB domain-containing protein VFG0483 Protein 1e-51 45