Gene Information

Name : Rahaq_3401 (Rahaq_3401)
Accession : YP_004214121.1
Strain : Rahnella sp. Y9602
Genome accession: NC_015061
Putative virulence/resistance : Unknown
Product : exonuclease RdgC
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2974
EC number : -
Position : 3680491 - 3681405 bp
Length : 915 bp
Strand : +
Note : PFAM: exonuclease RdgC; KEGG: spe:Spro_1027 recombination associated protein

DNA sequence :
ATGTTATGGTTTAAAAATTTGTTAGTTTACCGTTTGAGCCGTGAAGTTTCGTTATCTGCTGACGAAATGGAAAAACAGCT
CAGTGCTTTCACCTTTACCCCGTGCGGCAGCCAGGACATGTCGAAAACCGGCTGGGTCTCCCCGATGGGTTCCCACGGCG
GCGATGCGCTGACGCATGTCAACGGTGGTCAGATCCTGATCTGCGCCCGTAAAGAAGAAAAAATCCTGCCTTCTCCGGTG
ATTAAACAGGAGTTACAGGCCAAGATTGAGCAGCTCGAAGGTGAACAACACCGCAAGCTGAAAAAGACTGAAAAAGATTC
CCTGAAAGATGAAGTGTTGCACAGCCTGATGCCACGCGCCTTCAGCCGGTTCAGCCAGACATTCATGTGGATTGATACCG
TTAACGGCCTGATCATGGTTGACGCCGCCAGCGCCAAGAAAGCCGAAGACATGCTGGCGCTGCTGCGTAAAAGCCTCGGT
TCGCTGCCAGTGGTGCCGCTGACCATGGAAAGCCCGATCGAACTGACGCTGACCGAATGGGTGCGTTCCGGCGATACCCC
CGCCGGTTTTACGCTGCAGGACGAAGCCGAGCTGAAAGCGATCCTGGAGGAAGGCGGCGTGATCCGCTGTAAGAAACAGG
TGCTGGTCAGCGATGAAATCGCCACGCATATCGAGAACGGCAAACTGGTGACTAAGCTGGCGGTTGACTGGCAGGAACGT
ATCGCCGTGGTGCTGGCGGACGACGGCAGCATTAAGCGCCTGAAATTCAGCGACGTCATTCGTGATCAAAACGAAGATAT
CGACCACGAAGACTTCGCTGGGCGTTTCGATGCAGATTTCGTGCTGATGACCGGTGAACTGGCAGCGCTGATCCAGAACC
TGATCGAGGCATTAGGCGGCGAAGCGCAACGCTAA

Protein sequence :
MLWFKNLLVYRLSREVSLSADEMEKQLSAFTFTPCGSQDMSKTGWVSPMGSHGGDALTHVNGGQILICARKEEKILPSPV
IKQELQAKIEQLEGEQHRKLKKTEKDSLKDEVLHSLMPRAFSRFSQTFMWIDTVNGLIMVDAASAKKAEDMLALLRKSLG
SLPVVPLTMESPIELTLTEWVRSGDTPAGFTLQDEAELKAILEEGGVIRCKKQVLVSDEIATHIENGKLVTKLAVDWQER
IAVVLADDGSIKRLKFSDVIRDQNEDIDHEDFAGRFDADFVLMTGELAALIQNLIEALGGEAQR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_00998 YP_001437103.1 hypothetical protein Not tested Not named Protein 8e-91 60