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Name : Rahaq_0336 (Rahaq_0336) Accession : YP_004211093.1 Strain : Rahnella sp. Y9602 Genome accession: NC_015061 Putative virulence/resistance : Virulence Product : general secretory pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 372437 - 373963 bp Length : 1527 bp Strand : - Note : TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; KEGG: enc:ECL_02797 general secretion pathway protein E; SMART: AAA ATPase DNA sequence : ATGAACAGTGATAACGAAGTGCTATATAGACCCGTTGTGGAACAAGCCTCCCCTGTTCTGCCTTATACCTACGCCAAACA AAAAGGCGTAACGCTGCTTGATAACGTACTTTTTTGCCGACAGGACATTTCAGCGGAAACACTGCTCGAAGTACGTCGGA TCATGGGTGAAATAACGGCGGTCGAAATAGTGGAAACGACATTGTTCGATGAAAAGTTATCAGCAACCTACCAGCGTAGC AGCGGCGAGTCACAACAAATCATTGATGATATCGATAACGAGGTCGATCTTCTGTCTTTGTCTGAGGAATTACCTGATAA CGAAGACTTACTGGCCAGTGATGAAAATTCGCCGATCATCCGTCTGATTAATGCGGTGCTTTCTGAAGCAGTCAAAGAGG GTGCTTCGGATATCCATATCGAAACCTTCGAACGCATGCTCAGTATCCGGTTTCGTATCGATGGCGTCTTACGGCAAATC CTGCAACCGGCTCGCAAGCTGGCACCGTTCTTGGTATCGCGCATCAAGGTGATGGCGAAACTGGATATCGCTGAAAAACG TTTACCTCAGGATGGTCGCATTTCGTTACGTATCGGTCACCGGGCGATTGATATCCGCGTATCGACCATTCCAGCTCAAT ATGGTGAGCGTGTGGTGATGCGCCTTTTGGATAAAAATAATTTATGTCTTGAGATTCCACAACTTGGTCTGTCTCCACAG GACGAACAACAGCTATCGGCATTAATCCGTAAACCTCACGGGATCATTCTGGTCACCGGGCCGACCGGTTCAGGTAAAAG CACGACTCTGTACGCAGTTCTTTCTGCACTCAACAATAACGAGCGTAACATTCTTACTGTCGAAGACCCGATTGAGTATG AACTGGAGGGCGTGGGGCAAACGCAAGTTAACCCCCGTGTAGAAATGACATTTGCGCTCGGTTTGCGGGCGATTTTGCGT CAGGACCCGGATGTAGTCATGGTCGGTGAGATCCGCGACAATGAAACAGCTCAAATCGCGGTGCAGGCTTCACTGACCGG CCATCTGGTGATGTCAACATTGCATACAAATAGTGCCGTCGGTGCCATTACCCGTTTACGGGATATGGGTCTGGAGCCCT TCCTTCTCGCCTCCTCATTATTAGGCGTGGTGGCTCAGCGACTCGTGCGACGCCTTTGCCCGCATTGTACCCGACAGTCC CCGTTAGATGTGTCTCACATTCCTTTATTCCACTTTCTGCCTGAACCACCAGCCACTGTTTTTAAAGCCGTCGGATGTTC TCAATGCCATTTCACGGGCTATAAAGGCAGGGCGGCTATCCACGAATGCATGGTTGTTGATAACGCTATACGTCAGGCTA TTCATGAGAATCAGGATGAATTTTCCATTGAGAACATTCATCGCAAAACTGCCCGAAGCTTGCGGGAAAATGGACTGCTT AAAACCATTAGCGGCGAGACTACGCTGGAAGAAGTGATCAGAGTTACTGCCGAACAAGAGATAGCGACACGGGGAACGCC CTCATGA Protein sequence : MNSDNEVLYRPVVEQASPVLPYTYAKQKGVTLLDNVLFCRQDISAETLLEVRRIMGEITAVEIVETTLFDEKLSATYQRS SGESQQIIDDIDNEVDLLSLSEELPDNEDLLASDENSPIIRLINAVLSEAVKEGASDIHIETFERMLSIRFRIDGVLRQI LQPARKLAPFLVSRIKVMAKLDIAEKRLPQDGRISLRIGHRAIDIRVSTIPAQYGERVVMRLLDKNNLCLEIPQLGLSPQ DEQQLSALIRKPHGIILVTGPTGSGKSTTLYAVLSALNNNERNILTVEDPIEYELEGVGQTQVNPRVEMTFALGLRAILR QDPDVVMVGEIRDNETAQIAVQASLTGHLVMSTLHTNSAVGAITRLRDMGLEPFLLASSLLGVVAQRLVRRLCPHCTRQS PLDVSHIPLFHFLPEPPATVFKAVGCSQCHFTGYKGRAAIHECMVVDNAIRQAIHENQDEFSIENIHRKTARSLRENGLL KTISGETTLEEVIRVTAEQEIATRGTPS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-133 | 56 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-133 | 56 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Rahaq_0336 | YP_004211093.1 | general secretory pathway protein E | VFG2048 | Protein | 4e-135 | 56 |
| Rahaq_0336 | YP_004211093.1 | general secretory pathway protein E | VFG0182 | Protein | 6e-132 | 56 |
| Rahaq_0336 | YP_004211093.1 | general secretory pathway protein E | VFG1876 | Protein | 6e-121 | 51 |
| Rahaq_0336 | YP_004211093.1 | general secretory pathway protein E | VFG0233 | Protein | 9e-82 | 46 |
| Rahaq_0336 | YP_004211093.1 | general secretory pathway protein E | VFG0112 | Protein | 2e-89 | 45 |
| Rahaq_0336 | YP_004211093.1 | general secretory pathway protein E | VFG2426 | Protein | 5e-71 | 44 |
| Rahaq_0336 | YP_004211093.1 | general secretory pathway protein E | VFG1880 | Protein | 3e-78 | 43 |
