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Name : Rahaq_0335 (Rahaq_0335) Accession : YP_004211092.1 Strain : Rahnella sp. Y9602 Genome accession: NC_015061 Putative virulence/resistance : Virulence Product : general secretion pathway protein F Function : - COG functional category : N : Cell motility COG ID : COG1459 EC number : - Position : 371223 - 372440 bp Length : 1218 bp Strand : - Note : KEGG: ecz:ECS88_3715 general secretory pathway component, cryptic; TIGRFAM: general secretion pathway protein F; PFAM: Type II secretion system F domain DNA sequence : ATGAGCCGCTTCGCCTTTCATGCAATCACCCCGACGGGCAAGACGCAGCGAGGAGTAATTGATGCCGATTCTCTCCGCCT GGCGCGCCAGATTGTCCGCGAGCGGGGTTTAACGCTTCTTGAAATAAAGCAGGTGGGCAACTCGCTGACAACTCTAAATA GTAAAAATAAAGGATTGAAAACGCGTGTCCCTTCACATGCCATTTCACTATTCTCACGTCAGCTCGCCACATTAACCAAT GCAGCCCTGCCCGTAGAAGCCGCACTTGCCGTTATTGCCCGCCAAACCGAGCACGCCGGACTCACGCAAGTGCTGACCGC TGTGCGTAACAAAGTGGTGGAGGGACATACGCTAGCCGATGCATTATCTGATTTTCCTCGCCTATTTGATCCGATGTTCA GAACACTGGTCACGGCAGGTGAACGAACCGGACAACTCGGCACCGTACTGGAAAAAATGGCGGATTATTATGAAATCCGC CAGCAAATCAAAAGCAAGTTGTCGCAAGCCATGATTTACCCGGCCATGCTCACCATCATTGCCATTCTAGTGATTGTTAT TTTGCTGGTTGCCGTCGTCCCGCAAATCATTGAACAGTTTGTGCATATGAAACATACGCTGCCCATCTCCACCCGTATTT TAATTGGCGTCAGTGGTTTCCTGGAACGTACATGGTGGGTGATTGCCATAGTGGTTATCGCTTTCATCGCTACCTTCAGG CTGGCTCTGCGCCGTAAGCATAATCTTATGCGTTTTCATACGGCGTTGCTCGGTGTTGTCGTTTTAGGGCCACTGATCAG GGCCATCAATAGTGCCCGATATGCCCGGACTCTCAGTATCTTGCAATCGAGCGGCGTTCCTTTACTTGATGCGATGAAAA TCTCAACAGAAGGGATAACTAACCGCCGGATCCATTATTTACTTACCCAAGCGGCAGAACATGTTCGTCAGGGCAGCTCA CTCTTTGCTGTTCTGGAACAAACCCGCCTCTTCCCACCCATGATGCTCTACATGATTGCTTCCGGTGAACAAAGCGGGCG TCTTGGCGAGCTTATGGCACACGCGGATGACAATCAGGACAAGCTGATGCAACACCGGCTTTCAATGGTATTGGCGCTAT TTGAACCACTGCTGATTGTCACTATGGCCAGTATTGTTTTATTCATCATCATGTCGATTTTACAACCGATTCTCCAGCTT AATAATCTGGTCAGTTAA Protein sequence : MSRFAFHAITPTGKTQRGVIDADSLRLARQIVRERGLTLLEIKQVGNSLTTLNSKNKGLKTRVPSHAISLFSRQLATLTN AALPVEAALAVIARQTEHAGLTQVLTAVRNKVVEGHTLADALSDFPRLFDPMFRTLVTAGERTGQLGTVLEKMADYYEIR QQIKSKLSQAMIYPAMLTIIAILVIVILLVAVVPQIIEQFVHMKHTLPISTRILIGVSGFLERTWWVIAIVVIAFIATFR LALRRKHNLMRFHTALLGVVVLGPLIRAINSARYARTLSILQSSGVPLLDAMKISTEGITNRRIHYLLTQAAEHVRQGSS LFAVLEQTRLFPPMMLYMIASGEQSGRLGELMAHADDNQDKLMQHRLSMVLALFEPLLIVTMASIVLFIIMSILQPILQL NNLVS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 1e-71 | 43 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-71 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Rahaq_0335 | YP_004211092.1 | general secretion pathway protein F | VFG2049 | Protein | 4e-69 | 43 |
| Rahaq_0335 | YP_004211092.1 | general secretion pathway protein F | VFG0181 | Protein | 8e-71 | 42 |
