|
Name : Rahaq_3168 (Rahaq_3168) Accession : YP_004213889.1 Strain : Rahnella sp. Y9602 Genome accession: NC_015061 Putative virulence/resistance : Unknown Product : K+-transporting ATPase subunit B Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : - Position : 3423792 - 3425858 bp Length : 2067 bp Strand : + Note : KEGG: yen:YE2961 potassium-transporting ATPase subunit B; TIGRFAM: K+-transporting ATPase, B subunit; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolas DNA sequence : ATGAGTCGTAAACAACGTGCGTTATTTGAACCCCGTCTGATCCGCACTGCCCTGCTGGATTCGGTGAAAAAACTGGATCC CCGTGTTCAGTGGCGCAATCCGGTGATGTTCGTGGTGTATCTGGGCAGCATTCTGACCACACTGATCTGGCTGGCAATTC TGCTGCACCGGACCGACGGCAGCGCGGCTTTTACCGGCAGCGTGTCGCTTTGGCTGTGGTTTACCGTGCTGTTCGCCAAC TTCGCCGAAGCACTGGCGGAAGGCCGCAGCAAGGCGCAGGCGCAGAGCCTGAAAGGCGTGCAGAAAACCAGTTGGGCGAA AAAAATCTACGAACCACGCCCTGAATCGCCGGTGATTAAAGTCGCCGCCGATACCCTGCGCAAAGGCGATTACGTGCTGA TCGAAGCAGGCGATACCGTGCCATGCGACGGTGAAGTGCTGATCGGCGGTGCGTCGGTGGATGAAAGCGCCATTACCGGT GAATCTGCGCCGGTGATCCGCGAATCCGGCGGCGACTTCTCCTCGGTCACCGGCGGGACGCGCGTCTTGTCAGACTGGCT GGTGGTCGAATGTTCGGCGAACCCAGGCGATACCTTCCTCGACCGTATGATTGCGATGGTCGAAGGTGCGAAACGCCGCA AAACGCCAAACGAAGTGGCGCTGACGATTTTGCTGGTGGCGCTGACGCTGGTGTTCGTGCTGGCTACCGCCACGCTGTAT CCGTTCTCGCTGTTCAGTGTTGACGCCAGTCACGCTGGTATTCCGGTGACTGTCACCGTGCTGGTCGCCCTGCTGGTGTG TCTGATCCCGACCACCATCGGCGGTTTGCTGTCGGCGATTGGCGTGGCGGGTATGAGCCGCATGCTGGAAGCGAACGTCA TCGCCACCAGCGGCCGTGCGGTGGAAGCCGCCGGTGACGTGGATGTGCTGCTGCTGGATAAAACCGGCACCATCACGCTC GGTAACCGCCAGGCATCGCAGTTCCTGCCCGCGCCGCAGGTGACGGAACAGGAACTGGCCGATGCCGCGCAGTTATCCTC TCTGGCTGATGAAACGCCGGAAGGCCGCAGTATTGTGGTGCTGGCGAAGCAGCGCTTTAACCTGCGTGAACGCGATATTC ATTCGCTGAATGCAACCTTCGTGCCCTTCTCCGCGCAAACCCGCATGAGCGGCGTCAACGTCGGTGACCGCAGCATCCGT AAAGGGGCGGTTGACGCTATCCGTCGCCATGTGGAATCCAACGGCGGTACCTTCCCGAAAGCCGTCGAGGGGCTGGTGGA AACCGTGGCGCGTAAAGGCGGCACGCCGCTGGTGGTAGCAGAAGGCGCTAAAGTACTGGGCGTGGTTGAGCTGAAAGATA TTGTCAAAGGCGGTATCAAGGAACGCTTTGCCGAGCTGCGCAAAATGGGCATTAAAACGGTGATGATCACCGGGGATAAC CGCCTGACCGCCGCCGCGATTGCCGCCGAAGCGGGCGTGGATGATTTTCTGGCGGAAGCCACACCGGAAGCCAAACTGGC ATTGATTCGTCAGTATCAGTCAGAAGGTCGTCTGGTGGCGATGACCGGCGACGGTACCAACGATGCGCCGGCGCTGGCAC AGGCCGATGTCGCGGTGGCGATGAACTCCGGGACGCAGGCAGCGAAGGAAGCCGGGAACATGGTCGATCTCGACTCCAAC CCGACCAAGCTGATTGAAGTGGTGCATATCGGTAAACAAATGCTGATGACACGCGGCTCGCTGACCACCTTCAGTATTGC CAACGACGTGGCGAAGTATTTCGCCATTATCCCGGCGGCGTTCGCGGCAACCTATCCGCAACTCAATGCGCTGAACGTGA TGCACCTGACGTCGCCGTCTTCGGCCATTATGTCGGCGGTCATTTTCAACGCCCTGGTGATTGTGTTCCTGATCCCGCTG GCGCTGAAAGGGGTGAGCTATAAAGCCATGAGTGCCGCCGCCCTGTTGCGCCGTAACCTGTGGATTTATGGTGCGGGCGG GCTGCTGGTGCCGTTTGTGGGTATCAAGCTGATAGACGTGATCCTGACCGTTTTACATCTGAGCTGA Protein sequence : MSRKQRALFEPRLIRTALLDSVKKLDPRVQWRNPVMFVVYLGSILTTLIWLAILLHRTDGSAAFTGSVSLWLWFTVLFAN FAEALAEGRSKAQAQSLKGVQKTSWAKKIYEPRPESPVIKVAADTLRKGDYVLIEAGDTVPCDGEVLIGGASVDESAITG ESAPVIRESGGDFSSVTGGTRVLSDWLVVECSANPGDTFLDRMIAMVEGAKRRKTPNEVALTILLVALTLVFVLATATLY PFSLFSVDASHAGIPVTVTVLVALLVCLIPTTIGGLLSAIGVAGMSRMLEANVIATSGRAVEAAGDVDVLLLDKTGTITL GNRQASQFLPAPQVTEQELADAAQLSSLADETPEGRSIVVLAKQRFNLRERDIHSLNATFVPFSAQTRMSGVNVGDRSIR KGAVDAIRRHVESNGGTFPKAVEGLVETVARKGGTPLVVAEGAKVLGVVELKDIVKGGIKERFAELRKMGIKTVMITGDN RLTAAAIAAEAGVDDFLAEATPEAKLALIRQYQSEGRLVAMTGDGTNDAPALAQADVAVAMNSGTQAAKEAGNMVDLDSN PTKLIEVVHIGKQMLMTRGSLTTFSIANDVAKYFAIIPAAFAATYPQLNALNVMHLTSPSSAIMSAVIFNALVIVFLIPL ALKGVSYKAMSAAALLRRNLWIYGAGGLLVPFVGIKLIDVILTVLHLS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 3e-160 | 63 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 2e-160 | 63 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 3e-137 | 55 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 3e-137 | 55 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 3e-137 | 55 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 3e-137 | 55 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 2e-138 | 55 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 2e-137 | 55 |
