Gene Information

Name : Rahaq_3167 (Rahaq_3167)
Accession : YP_004213888.1
Strain : Rahnella sp. Y9602
Genome accession: NC_015061
Putative virulence/resistance : Unknown
Product : potassium-transporting ATPase subunit A
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2060
EC number : 3.6.3.12
Position : 3422060 - 3423748 bp
Length : 1689 bp
Strand : +
Note : TIGRFAM: potassium-transporting ATPase, A subunit; KEGG: ypi:YpsIP31758_1108 potassium-transporting ATPase subunit A; PFAM: K transporting ATPase A subunit

DNA sequence :
ATGGCTGCAACCGGATTCTTACTGATTGCCAGTTTTATGCTGGTGCTTTTGCTGCTGGCAAAACCACTGGGTAACTTTAT
TGCTCAACTGATTGAAGGACAGCCCGGCGCATTTATTCAGCGCATAGAAAACGGTGTTTTACGCACGTCTGGCAGCAGCA
ATGCTGAAATGAACTGGTGGCAGTATGCACTGGCGATCATGGTATTTAACATTCTGGGCATTATCGTGCTGATGGCGCTG
CTGATGGCGCAAGGCGTATTGCCGATGAACCCGCAGCATTTCGGCGGATTGTCATGGGATCTGGCCTTTAATACCGCAGT
GAGTTTCGTGACCAACACCAACTGGCAGGCTTACAGCGGCGAAAGCACGTTGAGCTATCTCAGCCAGATGGTCGGGCTGA
CTGTGCAAAACTTCCTCTCCGCAGCGACCGGTATCGCCGTGGCGTTTGCCCTGATCCGCGCCTTTGCACGCCCTTCAGCA
CACACCATCGGCAATGCCTGGACGGATTTATGGCGCATCACACTGTATCTGCTGCTGCCGGTGGCTTTCCTGCTGGCACT
GTTTTTCGTCAGTCAGGGTGTACTGCAAAACTTCGAAGCGTACCAGCACATCACCACACTGGAAGGCCTGCAACAGACCT
TACCTATGGGGCCGGTGGCTTCGCAGGAAGCGATCAAAATGCTCGGCACCAACGGCGGTGGCTTCTTTGGTGCTAACTCT
GCCCATCCGTTTGAGAACCCGACCGCACTGACCAACATGGTGCAGATGCTGGCGATCTTCATTATCCCTTGTGCCTTGTG
CTTCGCTTTTGGCCGCGTGGTCGGCGATAACCGTCAGGGGCACGCGCTGGTCTGGGCGATGTCGGTGATTTTCGTGGTGT
CGGTCGTGGTAGTGATGTACGCCGAGCTTAAAGGCAATCCGCACTTCATAGCACTTGGTGCCAGCAGCAATTTTAATATG
GAAGGTAAGGAAAGCCGCTTCGGCATTCTGGCCTCCAGCCTGTACGCCGTCGTCACTACGGCGGCCTCGTGCGGTGCGGT
CAACGCCATGCACGATTCCTTTACGGCACTCGGCGGTATGGTGCCGATGTGGCTGATGCAGATTGGCGAAGTGGTGTTCG
GCGGCGTGGGTTCCGGTCTGTACGGCATGCTGCTGTTTGTACTGCTGACGGTGTTTATCGCCGGGCTGATGATTGGCCGT
ACACCGGAATATCTCGGTAAGAAAATCGACGTTTACGATATGAAGATGACCGCGCTGGCAATCCTGGTGACACCGACGCT
GGTGCTGCTCGGCACGGCACTGGCGCTGGTCACCGACGCCGGTCGCGCAGGCATTTTAAACCCCGGCGCGCACGGATTCA
GTGAAGTGCTGTATGCGGTGTCTTCCGCTGCCAATAACAACGGCAGTGCGTTTGCCGGGCTGAGCGTCAATACACCGTTC
TACAACCTGTTGCTGGCAGCCTGTATGTTCTTCGGCCGCTTCGGCGTCATCATTCCGGTGCTGGCGATTGCCGGTTCTCT
GGTGATGAAAAAACGCCAGCAGGCAGGCAACGGCACGTTGCCGACATCCGGCCCGCTGTTCATCGGTCTGCTGGTCGGTA
CCGTGTTGTTAGTCGGTGCACTGACCTTTATTCCGGCGCTGGCGCTGGGACCGGTGGCAGAACATTTGCAGGTCTGGTCA
GCACAGTAA

Protein sequence :
MAATGFLLIASFMLVLLLLAKPLGNFIAQLIEGQPGAFIQRIENGVLRTSGSSNAEMNWWQYALAIMVFNILGIIVLMAL
LMAQGVLPMNPQHFGGLSWDLAFNTAVSFVTNTNWQAYSGESTLSYLSQMVGLTVQNFLSAATGIAVAFALIRAFARPSA
HTIGNAWTDLWRITLYLLLPVAFLLALFFVSQGVLQNFEAYQHITTLEGLQQTLPMGPVASQEAIKMLGTNGGGFFGANS
AHPFENPTALTNMVQMLAIFIIPCALCFAFGRVVGDNRQGHALVWAMSVIFVVSVVVVMYAELKGNPHFIALGASSNFNM
EGKESRFGILASSLYAVVTTAASCGAVNAMHDSFTALGGMVPMWLMQIGEVVFGGVGSGLYGMLLFVLLTVFIAGLMIGR
TPEYLGKKIDVYDMKMTALAILVTPTLVLLGTALALVTDAGRAGILNPGAHGFSEVLYAVSSAANNNGSAFAGLSVNTPF
YNLLLAACMFFGRFGVIIPVLAIAGSLVMKKRQQAGNGTLPTSGPLFIGLLVGTVLLVGALTFIPALALGPVAEHLQVWS
AQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0087 AAM75290.1 EF0087 Not tested Not named Protein 8e-79 49
kdpA NP_814333.1 potassium-transporting ATPase subunit A Not tested Not named Protein 1e-78 49
SAR0070 YP_039538.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 4e-56 43
truncated-kdpA NP_370596.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 4e-56 43
kdpA NP_373308.2 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 4e-56 43
kdpA YP_190030.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 4e-56 43
kdpA YP_251948.1 potassium-transporting ATPase subunit A Not tested SCCmec Protein 1e-57 43
unnamed BAB43902.1 potassium-transporting ATPase(A chain) Not tested Type-II SCCmec Protein 3e-56 43