Gene Information

Name : Rahaq_3165 (Rahaq_3165)
Accession : YP_004213886.1
Strain : Rahnella sp. Y9602
Genome accession: NC_015061
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3272
EC number : -
Position : 3420218 - 3421171 bp
Length : 954 bp
Strand : -
Note : PFAM: protein of unknown function DUF523; protein of unknown function DUF1722; KEGG: spe:Spro_1251 hypothetical protein

DNA sequence :
ATGACGAAAACAATTCCGATTGGTATCAGTGCATGCCTGCTGGGTGAAAATGTCCGCTTTGATGGCGGGCATAAGCGTCT
GGCGTTTGCCGTAGAGCAACTGGCGCCTTATGTGCGGTTCGAGCCGATCTGCCCGGAAATGGCGATAGGCTTACCGACGC
CGCGTCCGGCGCTGCGTCTGGTGAAAATGGATGACAGTATCGTGATGCGTTTCAGCAATGACGAGAGCATCGACGTCACC
GAAAAGATGCAGAGTTACGCCGAAAAACGCGTGGCGCCGCTGACCGGCCTTTGCGGTTATATCGTCTGTGCAAAATCCCC
GAGCTGCGGGATGGAGCGGGTGCGGGTGTACAGCGCTAACGGTAAAGATGCCAAAAAATCCGGTATCGGGATGTATACCG
CCGAGCTGATGAAACAGCATCCGTGGTTGCCGGTGGAAGAAGATGGCCGGTTAAACGATCCGGTGCTGCGGGAGAATTTT
GTTGAGCGCGTTTTTGCGCTGTTTGAACTGAACCAGCTTCGCGAAAGTGGCCTGACGCGCGGCAAACTGATGGCATTTCA
CAGCCGTTATAAACTCATTTTGCTGGCCCATTCTCAGCCGGAATATCGTGAGCTGGGGCGCTTTGTGGCTGCGATGGCAG
AGTGGGATTCCCTTGAGGACTACTTCACTGAATACCGGTTACGGCTGATGAACCTGTTGCTCCACAAAGCCACGCGCCGC
AATCACACCAACGTGCTGATGCATGTGCAGGGGTATTTCCGCAAACAGCTGAGTTCGCCGCAGCGTCAGGAACTTGCGGG
CCTGATCGACCGCTATCGCCAGGGCATGCAGCCGTTGCTGGCGCCGATCACCTTGCTCAAACATTACATGTCGGAATACC
CGGATGCCTATCTGGCTGACCAGCGTTATTTCGAGCCTTATCCGGAAGCTTTAAAACTTCGATACGGACATTAA

Protein sequence :
MTKTIPIGISACLLGENVRFDGGHKRLAFAVEQLAPYVRFEPICPEMAIGLPTPRPALRLVKMDDSIVMRFSNDESIDVT
EKMQSYAEKRVAPLTGLCGYIVCAKSPSCGMERVRVYSANGKDAKKSGIGMYTAELMKQHPWLPVEEDGRLNDPVLRENF
VERVFALFELNQLRESGLTRGKLMAFHSRYKLILLAHSQPEYRELGRFVAAMAEWDSLEDYFTEYRLRLMNLLLHKATRR
NHTNVLMHVQGYFRKQLSSPQRQELAGLIDRYRQGMQPLLAPITLLKHYMSEYPDAYLADQRYFEPYPEALKLRYGH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 1e-98 59
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 1e-98 59
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 1e-98 59
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 9e-99 59
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 2e-98 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rahaq_3165 YP_004213886.1 hypothetical protein VFG0490 Protein 5e-99 59