Gene Information

Name : Rahaq_3035 (Rahaq_3035)
Accession : YP_004213756.1
Strain : Rahnella sp. Y9602
Genome accession: NC_015061
Putative virulence/resistance : Virulence
Product : MerR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 3289702 - 3290646 bp
Length : 945 bp
Strand : +
Note : KEGG: ebi:EbC_13950 HTH-type transcriptional regulator MlrA (MerR-like regulator A); PFAM: regulatory protein MerR; SMART: regulatory protein MerR

DNA sequence : 
TTGTACAGAAATAATAAAGTTGTACAACTTTACGATGTGGCGCTAGAGTTAGCTTATAAGTGGTATGAATATTTGGATGG
AAATATGTCTCTGTACAGCATCGGTGAAGTCGCCCGAATTTGTGGTATCAACCCCGTCACGTTGCGTGCCTGGCAGCGGC
GTTATGGCCTGCTGAAGCCACAGCGCACAGAGGGTGGCCATCGTCTGTTTAATGATGATGATCTCGACACCATCCGCACC
ATTCTGGGCTGGATCAATCGCGGTATTCCGGTTGGTCAGGTGAAATCTTTGCTGGAAGGTAAAGTGGACGTGCTACCCGG
TGGCTGGTCGCAGTCAGAACATCAGCTGCTGACCGCCTTACAGGATGGCCGCCCGCAAAAAGTTCGTCAGTTGATGCTGG
AGTTCGGTCGTGAATACCCGGCGGTAACATTTGTGAATAACGTGCTTCGCCCCCTGCGTGAGCGCCTGAGTTCCGGCGAT
TCACGACTGCTGATGCTGCGCAGCCAGCTTGACGGTCTGATCATTGAACACGCGGTGATGTGCATGAACGCCGCCCGTAA
GCGTCCCGGACCGGCTGCCACGCTGATCGGCTGGGGGAACACAGACAGCACCGAGTTGTGGCTTGAGGCCATTGTGCGGT
GCGAAGAAGGTTTGCAGGTCGAAATATTGCCGGTTCCTCTCAGCGAGCCGTATCTGGAAAACCTGAGCGGCTCGCAAATT
CTGTTGTGGTCCGAAGGCAAGCTGACGCAGGTTCAGCGCCAGCGGCTGCAGCACTGGATGGCGCAGGGTTTGTCGATCAT
CCTGCTGGGCAGCTCAGCTATCCTGCTCGGCGCAGAAGAAACAGACGCTAAGGAAGATGAGCTCAGCGCCTCCCCCGATG
ACGATGATCATCGCGCCAGTCTTCGTATTGAGCCTGTTCGCCGGGAAGGAAAAAATGATGCTTAA

Protein sequence : 
MYRNNKVVQLYDVALELAYKWYEYLDGNMSLYSIGEVARICGINPVTLRAWQRRYGLLKPQRTEGGHRLFNDDDLDTIRT
ILGWINRGIPVGQVKSLLEGKVDVLPGGWSQSEHQLLTALQDGRPQKVRQLMLEFGREYPAVTFVNNVLRPLRERLSSGD
SRLLMLRSQLDGLIIEHAVMCMNAARKRPGPAATLIGWGNTDSTELWLEAIVRCEEGLQVEILPVPLSEPYLENLSGSQI
LLWSEGKLTQVQRQRLQHWMAQGLSIILLGSSAILLGAEETDAKEDELSASPDDDDHRASLRIEPVRREGKNDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1730 NP_456138.1 putative transcriptional regulator Not tested SPI-2 Protein 5e-49 46
t1258 NP_805061.1 transcriptional regulator Not tested SPI-2 Protein 5e-49 46
SC1411 YP_216398.1 MerR family transcriptional regulator Not tested SPI-2 Protein 1e-48 45
orf242 NP_460355.1 regulatory protein Not tested SPI-2 Protein 6e-49 45
ORF 242 CAB37409.1 - Not tested SPI-2 Protein 4e-49 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rahaq_3035 YP_004213756.1 MerR family transcriptional regulator VFG0491 Protein 2e-49 45