Gene Information

Name : Rahaq_2947 (Rahaq_2947)
Accession : YP_004213669.1
Strain : Rahnella sp. Y9602
Genome accession: NC_015061
Putative virulence/resistance : Unknown
Product : PTS system glucose-specific transporter subunit IIBC
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1263
EC number : 2.7.1.69
Position : 3199102 - 3200535 bp
Length : 1434 bp
Strand : -
Note : TIGRFAM: PTS system, glucose-specific IIBC subunit; PTS system, maltose and glucose-specific subfamily, IIC subunit; PTS system, glucose-like IIB subunint; KEGG: spe:Spro_1914 PTS system glucose-specific transporter subunits IIBC; PFAM: phosphotransferase

DNA sequence :
ATGTTTAAGAACGCGTTTGCAAACCTTCAAAAGGTCGGTAAATCGCTAATGCTGCCAGTATCCGTACTGCCAATCGCAGG
TATCCTGCTTGGCGTCGGTTCTGCAAACTTTAGCTGGCTGCCACTGATCGTTTCTCATGTTATGGCTGAAGCCGGTGGTT
CAGTCTTCGCTAATATGCCTTTGATCTTTGCTATTGGTGTTGCCTTAGGCTTCACTAACAACGACGGTGTTTCTGCACTG
GCGTCCGTTGTGGCATATGGCATCATGGTGAAAACCATGGCGGTTGTGGCTCCACTGGTTCTGCATTTGCCCGCTGAAGA
AATTGCAGCCAAGCATCTGGCCGATACCGGCGTACTGGGCGGTATCATCTCCGGTGCGATTGCGGCTTACATGTTCAACC
GTTTCTATCGTATCAAGTTGCCAGAATATCTGGGCTTCTTCGCCGGTAAACGTTTTGTTCCGATCATCTCTGGTCTGGCT
GCGATTATCCTGGGTGTGGTTCTGTCCTTCATCTGGCCGCCAATCGGTACAGGTATCCAGACCTTCTCACAATGGGCGGC
TTACCAGAACCCGGTCGTGGCATTCGGTATCTACGGTGTGGTAGAACGTGCACTTGTTCCGTTTGGTCTGCACCATATCT
GGAACGTTCCATTCCAGATGCAAATCGGTGAGTACGTGAACTCTGCAGGTCAGGTGTTCCACGGCGATATCCCACGTTAT
ATGGCCGGTGACCCAACTGCAGGTAAACTGTCAGGTGGCTTCCTGTTCAAAATGTACGGTCTGCCAGCCGCTGCGGTTGC
TATCTGGCATTCAGCGAAACCTGAAAATCGTGCAAAAGTCGGCGGCATCATGATTTCCGCTGCCCTGACTGCGTTCCTGA
CCGGTATCACTGAGCCAATCGAATTCTCCTTCATGTTCGTTGCGCCGATCCTGTACGTGATCCACGCGATTCTGGCCGGT
CTGGCATTCCCAATTTGTATCCTGTTGGGTATGCGTGACGGCACCAGCTTCTCGCACGGCCTGATCGACTTCATCGTTCT
GAGTGGTAACAGCAGCAAAATCTGGCTGTTCCCAATCGTAGGTGCGGTGTATGCGGTTGTTTACTACAGCATCTTCCGTT
TCCTGATTGCTAAGCTGGATCTGAAAACACCTGGTCGTGAAGACTCTACCAGCGAAACCACCGCGCAGGGCGGTTCTGAA
ATGTCCGCCTCTCTGGTTCAGGCTTTCGGCGGCAAAGACAACATCACTAACCTTGATGCCTGTATTACCCGTCTGCGCGT
CAGCGTAGCGGACGTCTCCAAAGTCGATCAGGCTGGCCTGAAAAAACTGGGTGCGGCAGGTGTTGTGGTTGCAGGTTCTG
GTGTTCAGGCGATTTTCGGTACCAAGTCTGACAACCTGAAAACCGATATGGACGAGTACATGCGTAGCCATTAA

Protein sequence :
MFKNAFANLQKVGKSLMLPVSVLPIAGILLGVGSANFSWLPLIVSHVMAEAGGSVFANMPLIFAIGVALGFTNNDGVSAL
ASVVAYGIMVKTMAVVAPLVLHLPAEEIAAKHLADTGVLGGIISGAIAAYMFNRFYRIKLPEYLGFFAGKRFVPIISGLA
AIILGVVLSFIWPPIGTGIQTFSQWAAYQNPVVAFGIYGVVERALVPFGLHHIWNVPFQMQIGEYVNSAGQVFHGDIPRY
MAGDPTAGKLSGGFLFKMYGLPAAAVAIWHSAKPENRAKVGGIMISAALTAFLTGITEPIEFSFMFVAPILYVIHAILAG
LAFPICILLGMRDGTSFSHGLIDFIVLSGNSSKIWLFPIVGAVYAVVYYSIFRFLIAKLDLKTPGREDSTSETTAQGGSE
MSASLVQAFGGKDNITNLDACITRLRVSVADVSKVDQAGLKKLGAAGVVVAGSGVQAIFGTKSDNLKTDMDEYMRSH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_2642 YP_859416.1 PTS system, glucose-specific IIBC component Not tested Not named Protein 4e-79 41