|
Name : Rahaq_2679 (Rahaq_2679) Accession : YP_004213412.1 Strain : Rahnella sp. Y9602 Genome accession: NC_015061 Putative virulence/resistance : Unknown Product : alpha amylase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 2916124 - 2917782 bp Length : 1659 bp Strand : - Note : KEGG: spe:Spro_2521 alpha amylase catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain DNA sequence : ATGGCAAACTGGTGGAAAGAGGCCGTGGCGTATCAGATCTATCCACGCAGCTTCAAAGACAGCAACCGCGATGGTATTGG CGATATTAACGGCATAACTGAAAAACTCGATTATCTTAAGGATCTGGGGATCGATCTGATCTGGATCTGTCCGATATATC AGTCACCCAACGACGACAACGGCTACGACATCAGCGATTACCAGCAAATCATGGCAGAATTTGGCACGATGGCCGATTTT GACCACCTGCTGGAGCAGGTCCATCTGCGCGGGATGCGGTTGATTATTGATTTGGTCGTTAATCATACTTCTGATGAACA TCCCTGGTTTGTGGAGTCGGGTTCCTCCCTCGATAATCCGAAACGCGACTGGTACATCTGGCGCGACGGTAAACAGGGGG GCGAGCCGAATAACTGGGAGAGCATTTTTAACGGGTCCGCCTGGAAATATAGCGCGGCTACCGGGCAGTACTTTTTACAT CTGTTTTCTGAAAGGCAGCCGGATCTCAACTGGGAGAACCCCGGGGTGCGCTCGGCCATTTACACCATGATGCGCTGGTG GCTTGATAAAGGCGTGGACGGCTTCCGAATTGATGCTATCTGTCATATGAAAAAAGAGCCAGCATTCAGTGACATGCCTA ATCCGCAGGGACTCCCTTATGTGCCGTCGTTCGAACGCCATCTGAATTATGACGGATTGCTCGATTACGTCGATGACATG TGTGAACAGGTACTCAGCCGCTACGACATTGTTACCGTCGGTGAGATGAACGGCGTCACCGCTGAACAGGGCGAAGAATG GGTTGGTGAGCAGCGCGGCAGACTGAACATGATCTTTCAGTTTGAGCACGTAAAGCTGTGGCAGGACGGTCAACACACTA AACCGCAGTCTGGCCTCGATCTGATGGGCTTAAAAGATATTTTCACGCGCTGGCAGACGCTGCTGGAAAATAAAGGCTGG AATGCGTTATACGTCGAGAACCATGATCTTCCCCGCGTGGTGTCAGGATGGGGCGACGCGGAAAACTATCATCGTGAGAG TGCGACTGCCATTGCGGCTATGTACTTCCTGATGAAAGGAACGCCGTTTATCTATCAGGGACAGGAGCTCGGCATGACCA ATACGCATTTCGCCAGCCTGGATGATTTTGACGATGTTGCCGCAAGAAAACGTGCGAGTGAAATGCGCAGACAGGGCATG GAGGAGTCAGACATTCTGGCAATTCTTAGCCGTACCGGGCGCGATAACTCACGCACACCGATGCAGTGGGATCATAGCAT TCATGGCGGTTTCAGCTCCGTGACGCCCTGGTTTCCTGCAAACAGCAATTACCGCGAAATCAACGTCGCGCAGCAGCGCG AAGATAACCATTCCGTTCTGAATTTTTATCGTGCGCTGATCCGCCTGCGGCGGCAGATGCCAGCGCTGATTGAGGGAAAC TATCAACTCCTGTTGCCTTCCCATCCCCATATTTACGCCTATCTGCGTACGCTGGAAAATCAGCAGATCCTGGTGATCGG TAATTTCAGCGCCTGTCCACAAGAGGTTGATTCACAACAGTTGGCGCTGGAAGGTGCGCAATTGCTACTGGGTAACTATC AGGAGGAGGGAGCGCTGCACATTTTACGGCCCTATGAAACACGGATTTATCAACGTTAA Protein sequence : MANWWKEAVAYQIYPRSFKDSNRDGIGDINGITEKLDYLKDLGIDLIWICPIYQSPNDDNGYDISDYQQIMAEFGTMADF DHLLEQVHLRGMRLIIDLVVNHTSDEHPWFVESGSSLDNPKRDWYIWRDGKQGGEPNNWESIFNGSAWKYSAATGQYFLH LFSERQPDLNWENPGVRSAIYTMMRWWLDKGVDGFRIDAICHMKKEPAFSDMPNPQGLPYVPSFERHLNYDGLLDYVDDM CEQVLSRYDIVTVGEMNGVTAEQGEEWVGEQRGRLNMIFQFEHVKLWQDGQHTKPQSGLDLMGLKDIFTRWQTLLENKGW NALYVENHDLPRVVSGWGDAENYHRESATAIAAMYFLMKGTPFIYQGQELGMTNTHFASLDDFDDVAARKRASEMRRQGM EESDILAILSRTGRDNSRTPMQWDHSIHGGFSSVTPWFPANSNYREINVAQQREDNHSVLNFYRALIRLRRQMPALIEGN YQLLLPSHPHIYAYLRTLENQQILVIGNFSACPQEVDSQQLALEGAQLLLGNYQEEGALHILRPYETRIYQR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 3e-125 | 48 |
