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Name : Rahaq_2579 (Rahaq_2579) Accession : YP_004213313.1 Strain : Rahnella sp. Y9602 Genome accession: NC_015061 Putative virulence/resistance : Unknown Product : xylose isomerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2115 EC number : 5.3.1.5 Position : 2807716 - 2809035 bp Length : 1320 bp Strand : + Note : TIGRFAM: xylose isomerase; KEGG: enc:ECL_00201 xylose isomerase; PFAM: Xylose isomerase domain-containing protein TIM barrel DNA sequence : ATGCACGCATATTTCGACAAGCTCGACGCAGTTCGCTACGAAGGTGCTAACAGCACTAATCCGCTGGCATTCCGTCATTA CAACCCTGAAGAAGTGATCCTCGGCAAAACGATGGCTGAGCATCTGCGTTTCGCGGCTTGTTACTGGCACACCTTCTGCT GGAATGGTAATGACATGTTCGGTGTGGGCGCCTTTGACCGCCCGTGGCAACATCCCGGTGACGCGCTGGAGCTGGCTAAA AGTAAAGCGGATGTCGCTTTCGAATTCTTCCAGAAGCTGAACGTGCCTTACTATTGCTTCCATGACGTTGACGTATCGCC GGAAGGGGCATCAATTAAAGAATACGTCAATAATTTTGCCATCATGACTGATGTACTGGCGCAAAAGCAGGAAGCCAGCG GTGTAAAATTGTTGTGGGGTACAGCTAACTGCTTCACCAATCCACGTTACGGCGCAGGCGCGGCGACCAATCCTAATCCA GAAATTTATACCTGGGCCGCAACGCAGGTTGTGCACGCCATGAATGCCACCAAACAACTGGGGGGCGAAAATTACGTGCT GTGGGGCGGCCGTGAAGGCTACGAAACCCTGCTCAATACTGATCTTCGTCAGGAACGCGAACAACTGGGTCGCTTCATGC AGATGGTCGTTGAGCACAAACACAAAATTGGCTTCCAGGGCACCCTGCTGATCGAACCTAAACCGCAGGAACCGACCAAG CATCAATATGATTATGATGTCGCTTCCGTCTATGGCTTCCTGAAACAGTTTGGCCTGGAAAAAGAGATCAAAGTGAATAT CGAGGCCAACCACGCCACGCTGGCGGGTCACTCATTCCACCATGAAATTGCTAACGCAATTGCTCTGGGTATCTTCGGTT CCGTCGATGCAAACCGTGGCGACCCGCAGTGTGGCTGGGATACCGATCAGTTCCCGAACAGCGTGGAAGAAAATGCGTTG GTGATGTATGAAATCATCAAAGCGGGCGGTTTCACCACCGGAGGCCTGAACTTTGACTCAAAAGTTCGTCGCCAGAGCAC CGATAAATATGACCTGTTCTACGGCCATATCGGTGGAATGGACACCATGGCGCTGGCGCTGAAAGTGGCAGCCCGTATGA TTGAAAGCCGTGAACTGGATAAGCATGTTGCCCAACGTTACGCTGGCTGGAACACAGAATTGGGCCAGCAGATCCTGCAA GGCAAAATGTCACTGGAATCCCTGAGCAACTATGCGCAACACAACGCGCTGGCCCCTCAGCACCAGAGCGGTCAGCAGGA GCGTCTGGAGAATCTGGTTAACCGCTATCTGTTTGGTTAA Protein sequence : MHAYFDKLDAVRYEGANSTNPLAFRHYNPEEVILGKTMAEHLRFAACYWHTFCWNGNDMFGVGAFDRPWQHPGDALELAK SKADVAFEFFQKLNVPYYCFHDVDVSPEGASIKEYVNNFAIMTDVLAQKQEASGVKLLWGTANCFTNPRYGAGAATNPNP EIYTWAATQVVHAMNATKQLGGENYVLWGGREGYETLLNTDLRQEREQLGRFMQMVVEHKHKIGFQGTLLIEPKPQEPTK HQYDYDVASVYGFLKQFGLEKEIKVNIEANHATLAGHSFHHEIANAIALGIFGSVDANRGDPQCGWDTDQFPNSVEENAL VMYEIIKAGGFTTGGLNFDSKVRRQSTDKYDLFYGHIGGMDTMALALKVAARMIESRELDKHVAQRYAGWNTELGQQILQ GKMSLESLSNYAQHNALAPQHQSGQQERLENLVNRYLFG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| xylA | NP_814326.1 | xylose isomerase | Not tested | Not named | Protein | 4e-106 | 50 |
| ef0082 | AAM75286.1 | EF0082 | Not tested | Not named | Protein | 3e-106 | 50 |
