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Name : Rahaq_2499 (Rahaq_2499) Accession : YP_004213233.1 Strain : Rahnella sp. Y9602 Genome accession: NC_015061 Putative virulence/resistance : Virulence Product : flagellar biosynthetic protein FliP Function : - COG functional category : N : Cell motility COG ID : COG1338 EC number : - Position : 2736479 - 2737261 bp Length : 783 bp Strand : + Note : KEGG: spe:Spro_2957 flagellar biosynthesis protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein DNA sequence : ATGACCTTGTTGAAATCCGCCCTTACCGCTGCCCGTCAGCGCCCTGTTCGCCTGGTCACTCACCTGTGTCTGCCGCTGCT ATTGCTTGCCAGCCCGGCAGCTTTTGCACAGTTACCGGGGATCATCAGCCAGCAGATGTCTAACGGGACACAAAACTGGT CGCTGCCGATCCAGACGCTGGTGTTTATCACCACACTGACCCTGTTACCTGCGATGCTGCTGATGTGTACCAGTTTTACC CGCATCATTATCGTGCTGGGTTTACTGCGAAATGCACTGGGTACTCCTTCCGCGCCGCCAAACCAGGTGCTGCTCGGCCT TGGCCTGTTTCTGACCTTCTTCGTGATGGCACCGGTATTCGACAAAATTTACAGCGATGCTTATCAGCCCTTCAGCGAAA ACAAGATCACCATGCAGGAAGCAATGGACAAAGGCGCTCAGCCGTTACGCCAGTTTATGCTGCGCCAGACCCGCGAAAGC GATCTCGCTTTGTATGCGCGTCTGGCCAATATCCCGCCTCTTGCAGGCCCGGAAGCCGTGCCGATGCGTATTTTGTTACC GGCTTACGTCACCAGCGAACTGAAAACCGCTTTCCAGATTGGCTTCACCGTATTCATACCGTTCATGATTATCGACCTGG TGGTCGCCAGCGTACTGATGGCGCTGGGGATGATGATGGTGCCACCCGCCACCATCTCACTGCCGTTCAAGCTGATGTTG TTTGTGCTGGTCGATGGCTGGCAACTGCTGCTCGGATCGCTGGCGCAGAGTTTTTACAGTTAA Protein sequence : MTLLKSALTAARQRPVRLVTHLCLPLLLLASPAAFAQLPGIISQQMSNGTQNWSLPIQTLVFITTLTLLPAMLLMCTSFT RIIIVLGLLRNALGTPSAPPNQVLLGLGLFLTFFVMAPVFDKIYSDAYQPFSENKITMQEAMDKGAQPLRQFMLRQTRES DLALYARLANIPPLAGPEAVPMRILLPAYVTSELKTAFQIGFTVFIPFMIIDLVVASVLMALGMMMVPPATISLPFKLML FVLVDGWQLLLGSLAQSFYS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcR | AAT96262.1 | HrcR | Virulence | S-PAI | Protein | 3e-24 | 44 |
| hrcR | AAT96303.1 | HrcR | Virulence | S-PAI | Protein | 3e-24 | 44 |
| hrcR | AAT96343.1 | HrcR | Virulence | S-PAI | Protein | 3e-24 | 44 |
| hrcR | ABA47279.1 | HrcR | Virulence | S-PAI | Protein | 9e-24 | 44 |
| hrcR | ABQ88359.1 | HrcR | Virulence | Hrp PAI | Protein | 1e-15 | 43 |
| hrpW | AAB05075.1 | HrpW | Virulence | Hrp PAI | Protein | 1e-15 | 43 |
| hrcR | NP_791222.3 | type III secretion protein HrcR | Virulence | Hrp PAI | Protein | 3e-17 | 42 |
| hrcR | AAG33884.1 | HrcR | Virulence | Hrp PAI | Protein | 4e-17 | 42 |
| hrcR | AAT96146.1 | HrcR | Virulence | T-PAI | Protein | 2e-16 | 42 |
| hrcR | AAT96200.1 | HrcR | Virulence | T-PAI | Protein | 2e-16 | 42 |
| XC_3016 | YP_244084.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 1e-27 | 42 |
| hrcR | NP_636600.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 1e-27 | 42 |
| YPO0270 | YP_002345352.1 | type III secretion system protein | Virulence | Not named | Protein | 6e-24 | 42 |
| hrcR | AAP34349.1 | HrcR | Virulence | Hrp PAI | Protein | 7e-27 | 41 |
| lscR | AAO18040.1 | LscR | Virulence | TTSS locus | Protein | 8e-25 | 41 |
| escR | AAC31528.1 | L0049 | Virulence | LEE | Protein | 3e-26 | 41 |
| escR | ACU09473.1 | type III secretion system protein EscR | Virulence | LEE | Protein | 3e-26 | 41 |
| escR | YP_003223490.1 | T3SS structure protein EscR | Virulence | LEE | Protein | 5e-26 | 41 |
| escR | AAK26700.1 | EscR | Virulence | LEE | Protein | 4e-26 | 41 |
| escR | YP_003232138.1 | type III secretion system protein | Virulence | LEE | Protein | 5e-26 | 41 |
| escR | AAL57527.1 | EscR | Virulence | LEE | Protein | 4e-26 | 41 |
| escR | YP_003236103.1 | T3SS structure protein EscR | Virulence | LEE | Protein | 4e-26 | 41 |
| escR | CAC81847.1 | EscR protein | Virulence | LEE II | Protein | 4e-26 | 41 |
| escR | NP_290283.1 | type III secretion system protein | Virulence | LEE | Protein | 4e-26 | 41 |
| escR | CAI43889.1 | EscR protein | Virulence | LEE | Protein | 4e-26 | 41 |
| ECs4583 | NP_312610.1 | type III secretion system protein | Virulence | LEE | Protein | 4e-26 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Rahaq_2499 | YP_004213233.1 | flagellar biosynthetic protein FliP | VFG2338 | Protein | 8e-80 | 87 |
| Rahaq_2499 | YP_004213233.1 | flagellar biosynthetic protein FliP | VFG2494 | Protein | 2e-60 | 67 |
| Rahaq_2499 | YP_004213233.1 | flagellar biosynthetic protein FliP | VFG1259 | Protein | 1e-52 | 62 |
| Rahaq_2499 | YP_004213233.1 | flagellar biosynthetic protein FliP | VFG2016 | Protein | 4e-50 | 57 |
| Rahaq_2499 | YP_004213233.1 | flagellar biosynthetic protein FliP | VFG0044 | Protein | 2e-26 | 42 |
| Rahaq_2499 | YP_004213233.1 | flagellar biosynthetic protein FliP | VFG0394 | Protein | 5e-26 | 42 |
| Rahaq_2499 | YP_004213233.1 | flagellar biosynthetic protein FliP | VFG0188 | Protein | 8e-27 | 42 |
| Rahaq_2499 | YP_004213233.1 | flagellar biosynthetic protein FliP | VFG0827 | Protein | 2e-26 | 41 |
