Gene Information

Name : Rahaq_2384 (Rahaq_2384)
Accession : YP_004213118.1
Strain : Rahnella sp. Y9602
Genome accession: NC_015061
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1126
EC number : -
Position : 2607467 - 2608297 bp
Length : 831 bp
Strand : -
Note : KEGG: eta:ETA_04760 GltL protein; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGCCGCAAGACACTTACTCAACCGCAGCAACGTCTGCGGTTTTTTCACATTCATCCGCCGGTAAAACCGCTGCCGTCGA
ATTTCGTCAGGTCAGTAAATCTTTTGGTCCGCATGAAGTGATCCGCAACGTCGATTTGCGTGTGGACAGCGGCGAAGTGG
TGGCCGTTTGCGGGCCTTCCGGCTCCGGAAAATCCACCCTGATCCGCCTGATTAATCAGCTTGAATCCGCCTCAGGCGGC
GAGATCCTGATCGACAATCTGCCGACGCGAAACCTCAAAGGCGCGGCATTACGCCAGTTACGCACGCATATCGGTTTCGT
GTTTCAGCAGTTCAATCTGTATGCCCATCTCACCGCCGAAGACAACGTCAGTCTGGCGCTGATCAAAGTGCATGGCTGGA
AGAAAAGTGAAGCGCGGGAAAAGGCGCGGGCGCTGCTGACGCGTGTCGGGCTGGGGGATAAAGCGCGGCATTATCCCGAG
CAGCTATCCGGCGGTCAGCAACAGCGCGTGGCAATTGCCCGGGCGCTGGTCACCGATCCGAACATAATTTTATTTGATGA
ACCGACTTCAGCGCTCGATCCGGAAATGATCGGCGAAGTGCTGCTGGTGATGCAGGAGCTGGCGAAAAGTGGCATCACCA
TGATTGTGGTGACGCACGAAATGAGTTTTGCCCGTGAAATCGCCGACCGGGTGATTTTCATGGATGGCGGAGAAATTCTC
GAACAGGCGCAGCCGGAAGATTTCTTCCTGCGTCCGCAACATCCGCGCGCGCAGCGGTTTTTGCAGAAAGTATTGTTTCC
GCTGCATCCGCAGGCAGGAGCAGAGCGATGA

Protein sequence : 
MPQDTYSTAATSAVFSHSSAGKTAAVEFRQVSKSFGPHEVIRNVDLRVDSGEVVAVCGPSGSGKSTLIRLINQLESASGG
EILIDNLPTRNLKGAALRQLRTHIGFVFQQFNLYAHLTAEDNVSLALIKVHGWKKSEAREKARALLTRVGLGDKARHYPE
QLSGGQQQRVAIARALVTDPNIILFDEPTSALDPEMIGEVLLVMQELAKSGITMIVVTHEMSFAREIADRVIFMDGGEIL
EQAQPEDFFLRPQHPRAQRFLQKVLFPLHPQAGAER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-25 41
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 8e-19 41
SAS0419 YP_042546.1 ABC transporter ATP-binding protein Not tested vSa¥á Protein 8e-44 41
SAR0461 YP_039910.1 ABC transporter ATP-binding protein Not tested vSa¥á Protein 2e-43 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rahaq_2384 YP_004213118.1 ABC transporter NC_012469.1.7686878. Protein 3e-32 44