Gene Information

Name : Rahaq_2265 (Rahaq_2265)
Accession : YP_004213002.1
Strain : Rahnella sp. Y9602
Genome accession: NC_015061
Putative virulence/resistance : Unknown
Product : glutamate synthase, small subunit
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0493
EC number : -
Position : 2477164 - 2479143 bp
Length : 1980 bp
Strand : +
Note : KEGG: dda:Dd703_4011 oxidoreductase Fe-S binding subunit; TIGRFAM: glutamate synthase, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase

DNA sequence :
ATGAACCAATTTATTATTGCTGATTCTCAGGCTTGCATAGGTTGTCGCGCCTGTGAGGTCGCTTGCGTCTTGTCTCACAA
TGAACAATGTTATCCGTCGAAAGAACAGTTTACCCCGCGCATTCATGTCATCCGGCAAAACGATCGGCATAGCGCCGTGC
TATGCCGTCAGTGCGAAGATGCCCCGTGTTTACAGGTTTGCCCGACAAACGCATTCGTTCGTCGTAACGACAGCATTCAG
TTGCTGGAAGAACGCTGTATCGGCTGTAAAACCTGCGCCGTGGCCTGTCCGTTTGGCGCCATTGATATCGTACAGCATGA
GAGCTATCCGCTGACCGGCTTACCCGCCGCGGCAGCCGTGGCGCATAAATGTGATCTGTGCAATGACAGCCCGGACGGAC
AGGCATGCGTCAATGCCTGCCCGACACAGGCACTGCATCTCATCACCGATCAGGTCATTGCTCAGAACCGCGCTGATAAA
CAATACCGCGCCGCCATGGGCCGGAATCCACAGGTTTCGCTGACCAGCAAATCAGCGGCCGTATTCGCCGCCGCCCTGGC
ACCACCGCGCCTCGATGCGGCAAAAGCCCCGCTCACCGAACGTAAAAGCACGTTTAATGAGATCTATGCGCGCTTTACAC
CGATGCAGGTTGAAGAACAGGCTGGCCGCTGTCTGCATTGCAGTGATCACCCTTTCTGCGCCTGGACCTGCCCGCTGCAT
AACGATATCCCACAATTACTGGCGCTGGCGAAACAGGGACACATTCTGGAAGCCGTAGAGCTTTCGCACCGCACCAGCAG
CCTGCCGGAGATCTGTGGCCGCGTCTGCCCGCAGGACAGGCTTTGCGAAGGCGCCTGCACTTTTGATAAACAAGGCTCAG
TGAGCATCGGCAATATTGAGCGCTATATTACCGATACCGCGCTGGCACAAGGCTGGAAACCCGATCTTTCAGAGGTTATT
CCGCGTAATTATCGCGTAGCCGTGGTGGGTGCAGGCCCGGCCGGATTGGGCTGCGCTGACGTGCTGGCGCGGCATGGCGT
AAAAGCCGTGGTCTTTGATCGTCACCCTGAAATCGGCGGCCTGCTGACCTTTGGTATTCCGGCGTTCAAGCTGGATAAAA
ACGTGCTGGTCAGACGCCGGGAAATCTTCACTGAAATGGGCATTGAGTTCCGGCTCAATACCGAAATCGGCGTCGACATT
CAGGCGGAACAACTGCTGGAAGAGTTCGATGCAATATTCTTAGGTGTGGGTACGTATAAAGCGATGAAAGCCGGACTGGA
AAATGAAAACGCGCCGGGCGTTTACAGCGCCCTGCCGTTCCTGATTGCGAACGCCAAACATCTGATGAATTTGCCCGAAC
TGAAACATGAGCCTTATGTCAGCATGGCGGGAAAACGCGTGGTCGTGCTCGGCGGCGGCGATACGGCGATGGATTGTCTG
CGCACGTCGCTGCGCCAGAATGCCAAAAGCGTGATTTGTGCGTATCGCCGCGATGAAATAAGCATGCCGGGCTCGAAGAA
AGAAGTGAAAAACTCACGCGAGGAAGGGGCTGAGTTTATGTTTAACGTTCAGCCGGTGAGCATTGAGCTGAATAACCGGG
GCGAAGTCTGCGGTATCCGCTTAGTCCGTACCGCCCCGGGAGAACCGGATGCCAGCGGCAGACGCAGACCCACACCGATT
GCCGGTTCTGAATTCCTGCTCGAAGCGGAAGCGGTCATTATGGCATTTGGCTTTCTGCCGCATGCTATGCCGTGGCTGGA
TGAACTGTCGGTGAGGCACGACGAACAGGGATTGTTACAGGCCCCGCATCACAGCCGCTTCCCGTATCAGACCAGTCACC
CGCAGATATTTGCAGGCGGCGATGCGGTGCGGGGCGCCGACCTGGTGGTGACAGCTATGTCGGACGGACGACAGGCAGCA
AACAGCATTATTGCATCGCTGGATTTCCGTACACCGGCTCTCAGACCGGCGGCCCATTAG

Protein sequence :
MNQFIIADSQACIGCRACEVACVLSHNEQCYPSKEQFTPRIHVIRQNDRHSAVLCRQCEDAPCLQVCPTNAFVRRNDSIQ
LLEERCIGCKTCAVACPFGAIDIVQHESYPLTGLPAAAAVAHKCDLCNDSPDGQACVNACPTQALHLITDQVIAQNRADK
QYRAAMGRNPQVSLTSKSAAVFAAALAPPRLDAAKAPLTERKSTFNEIYARFTPMQVEEQAGRCLHCSDHPFCAWTCPLH
NDIPQLLALAKQGHILEAVELSHRTSSLPEICGRVCPQDRLCEGACTFDKQGSVSIGNIERYITDTALAQGWKPDLSEVI
PRNYRVAVVGAGPAGLGCADVLARHGVKAVVFDRHPEIGGLLTFGIPAFKLDKNVLVRRREIFTEMGIEFRLNTEIGVDI
QAEQLLEEFDAIFLGVGTYKAMKAGLENENAPGVYSALPFLIANAKHLMNLPELKHEPYVSMAGKRVVVLGGGDTAMDCL
RTSLRQNAKSVICAYRRDEISMPGSKKEVKNSREEGAEFMFNVQPVSIELNNRGEVCGIRLVRTAPGEPDASGRRRPTPI
AGSEFLLEAEAVIMAFGFLPHAMPWLDELSVRHDEQGLLQAPHHSRFPYQTSHPQIFAGGDAVRGADLVVTAMSDGRQAA
NSIIASLDFRTPALRPAAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YP0342 CAF28571.1 putative oxidoreductase Not tested YAPI Protein 0.0 59