Gene Information

Name : Rahaq_2137 (Rahaq_2137)
Accession : YP_004212875.1
Strain : Rahnella sp. Y9602
Genome accession: NC_015061
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG3842
EC number : -
Position : 2328437 - 2329186 bp
Length : 750 bp
Strand : -
Note : KEGG: pct:PC1_1222 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence :
ATGATCATTCCAGCTACAGCCAGCGGGAATGCGCCTGCGCGCATGTCTTCTCCCCCCGCGATCTCTGTCCATCAGGTGTC
CCATTTCTTTGGGAGCAACCCGGTACTCAATCACGTCAATTTATCCGTGCCGGAAGGCACGATCCTCGCCCTGCTTGGCC
CTTCCGGCTGCGGAAAAAGTACGCTGCTGAAAATGCTGGCGGGATTACTCCATCCTGCGTCAGGACAAATCAGCTTTGAT
GGTGTCACTGTCGCCAGCGGGAAAATCAGTCTGCCACCGGAAAAACGCAATCTCGGCATGGCCTTTCAGGATTATGCCCT
GTGGCCGCACATGACCGTGCGCCAGAACGTCGCGTTTCCGTTGCAGATGCGCGGCATCCGCGGTGCGATACAGCAGGAGA
AAGTGATGGCGGCGCTGGAGCGCGTCGGACTGGCGGATTTTGTCTCCCGCCGCCCTGCCGAACTTTCCGGCGGTCAGCAA
CAGCGTGTGGCCCTCGCCCGCGCCATTGTGGCTGAGCCACGCATTTTGCTGTTCGACGAGCCGCTGTCGAATCTTGACCG
CGACCTGCGGGAAAGCCTGTGCGAGGAAATGGCAACATTGTTGCGCCAGCTCGGCACCACGGCGGTGTATGTCACCCACG
ATCAGCACGAGGCTCACGCACTCGCTCACCGCATTGCGCGCATGGACAAAGGCGCGATCGCCAGCATTGACCAGATTGAC
CCTTCCGTTGTTTCACCTTTTGTTGCTTAA

Protein sequence :
MIIPATASGNAPARMSSPPAISVHQVSHFFGSNPVLNHVNLSVPEGTILALLGPSGCGKSTLLKMLAGLLHPASGQISFD
GVTVASGKISLPPEKRNLGMAFQDYALWPHMTVRQNVAFPLQMRGIRGAIQQEKVMAALERVGLADFVSRRPAELSGGQQ
QRVALARAIVAEPRILLFDEPLSNLDRDLRESLCEEMATLLRQLGTTAVYVTHDQHEAHALAHRIARMDKGAIASIDQID
PSVVSPFVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 5e-29 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rahaq_2137 YP_004212875.1 ABC transporter BAC0600 Protein 1e-25 43
Rahaq_2137 YP_004212875.1 ABC transporter NC_008702.1.4606598. Protein 1e-20 42