Gene Information

Name : Rahaq_2130 (Rahaq_2130)
Accession : YP_004212868.1
Strain : Rahnella sp. Y9602
Genome accession: NC_015061
Putative virulence/resistance : Unknown
Product : LysR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0583
EC number : -
Position : 2320207 - 2321106 bp
Length : 900 bp
Strand : +
Note : PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: yen:YE2022 LysR family transcriptional regulator

DNA sequence :
ATGAACCACATCGAACTGCGTCATTTACGTTATTTCATCGCTGTTGCCGAGGAACTGCATTTTGGCCGGGCAGCGGAACG
TCTGCACATGTCCCAGCCGCCGCTGAGCCAGCAAATTCAGGCGCTGGAAACCCATCTCGGCGCCGCGCTGTTTTACCGCA
ACAACCGCAGCGTGCGGCTGACGCAGGCGGGACAGGCGTTTCTGCCGGAAGCCCGGCAGATTTTGCAGCGTGTCGGTGAG
GCGTCCGCTCAGGCGGCACGCATTCATCGCGGCGAGTCTGGCAATCTGACCCTCGGGCTGACCTCTTCGGCACCGTTTTT
ACGTCGTGTTTCCCGCACCTTGCACCGTTTTCGTCTGACCTATCCGGATGTCAATATTCGCATTGAGCAGCTCAACAGCA
AACAGCAGATCGAACCGTTACTGGAGGGAAAACTGGATCTGGGCATTATGCGTAATGGCGAGTTACCGGAGGAGCTGGAA
CACCATCTTGTGCTGTCCGAGCCGCTGATTGCTGTGGTGCACAAAGACCATCCGCTGAATGCGCTTAAAGAGGGTGAACT
GACTTTTCAGCACCTTGCCGATCAGCCTTTTGTGTTTTTCTCCAAAGATGTCGGCACGTCGCTTTACGACGATATACTCG
GCCAGCTCAAAGTGCAGGGGATCACGCCGTATATCACTCAGGAAGTCGGCGAACCGCTGACCATTATCGGCCTGGTCGCG
GCCGGTCTCGGGGTGTCAATTCTGCCCGCTTCTTATCTGCGTATTCAGGTTGAAGGGGTGAGGTATTTGCGATTTGGCAC
GCTACAGGGCACGACAGCGCTTTGGCTGGTGAATCACGCACGGCGTCCTGCGACTGCCGCAGCCCGGGCATTTATGGATT
TGTTGTTACACGAAGAATAA

Protein sequence :
MNHIELRHLRYFIAVAEELHFGRAAERLHMSQPPLSQQIQALETHLGAALFYRNNRSVRLTQAGQAFLPEARQILQRVGE
ASAQAARIHRGESGNLTLGLTSSAPFLRRVSRTLHRFRLTYPDVNIRIEQLNSKQQIEPLLEGKLDLGIMRNGELPEELE
HHLVLSEPLIAVVHKDHPLNALKEGELTFQHLADQPFVFFSKDVGTSLYDDILGQLKVQGITPYITQEVGEPLTIIGLVA
AGLGVSILPASYLRIQVEGVRYLRFGTLQGTTALWLVNHARRPATAAARAFMDLLLHEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
stmR AAK97547.1 StmR Not tested SPI-6 Protein 3e-36 41