Gene Information

Name : Rahaq_2121 (Rahaq_2121)
Accession : YP_004212859.1
Strain : Rahnella sp. Y9602
Genome accession: NC_015061
Putative virulence/resistance : Unknown
Product : anaerobic C4-dicarboxylate transporter
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG3069
EC number : -
Position : 2309369 - 2310736 bp
Length : 1368 bp
Strand : -
Note : KEGG: yen:YE2780 C4-dicarboxylate transporter DcuC; TIGRFAM: anaerobic c4-dicarboxylate antiporter, DcuC family; PFAM: C4-dicarboxylate anaerobic carrier-like

DNA sequence :
ATGCTGGAATTACTGATCGGGCTGGTAGTCGCCGTCTTTGTCGGCCGCTATATCATTAAAGGCTATTCACCCACCGGCGT
TCTGATGGTCGGCGGCTTATTATTGCTGATTATCAGCGCCATCATGGGTCACAGCATCCTGCCGGAAGGCACCAAAAGTA
CCGGCTGGAATGCGACAGATATCGTTGAGTACGTCAAAATTCTGCTGATGAGCCGCGGTGGCGATCTGGGGATGATGATC
ATGATGCTGTGCGGTTTCGCAGCCTATATGACCCATATTGGTGCCAACGATGTGGTCGTCAAACTGGCGTCGCGCCCGTT
ACAGATGATCAATTCACCGTACATTCTGATGGTTGCGGCGTATATTCTGGCGTGTCTGATGTCCCTGGCCGTGTCTTCGG
CGACCGGTCTGGGCGTGTTACTGATGGCAACGTTGTTCCCGATTATGGTTAACGTCGGCATCAGCCGGGGCGCGGCGGCG
GCGATTTGTGCGTCTCCTGCGGCGATCATTCTTTCCCCTACCTCAGGTGATGTGGTGCTGGCGGCGCAGGCGGCGAATAT
GCCGCTGGTGGATTTTGCCTTTAAAGTCACCCTGCCGATTTCGATTGCTGCCATCGCGGCGATGGCGGTCGCGCACTTCT
TCTGGCAACGCTATCTGGATAAACGCGATACCTCCGTGCTGGCAGATGCTGTCGATTCCAATGCTGACGATGTCATTGAA
ACCAATGCTCCGGCTTTCTACGCTATTTTGCCTTTCACGCCGATTATCGGTGTGCTGATTTTTGACGGTAAATGGGGACC
CAATCTGCATATCATCACCATTCTGGTGATTTGTATGTTACTGACCGCCCTGATTGAAACCGTGCGTAACCGTAACGGCA
AAGCGGTATTCGCCGGACTGGACGTGGCTTATCGCGGCATGGCGGATGCATTCGCCAACGTGGTGATGCTGCTGGTCGCG
GCGGGCGTGTTTGCTCAGGGGCTGAGCACCGTCGGGTTCATCAGCAGCCTGATAGGACTGGCGCAAAACTTTGGCTCCGG
CAGCATCGTCATGATGCTGGTGCTGGTAGTCATCACCGTGCTCGCCGCCATGACCACCGGCTCCGGTAATGCTTCGTTTT
ACGCCTTCGTCGAACTTATCCCGAAACTGGCCGCGAAAATGGGCATCAACCCGGAATATCTGGTCATCCCGATGTTGCAG
GCATCCAACCTGGGTCGCACTATTTCCCCTGTTTCGGGCGTCATAGTGGCCGTGGCCGGTATGGCAAAAATATCGCCTTT
CGAAGTCGTCAAACGCACGTCCGTTCCCGTGCTGGTTGGCCTGATTGTGGTAATTGTCGCCACCGAAATTCTGGTGCCGG
TGCATTAA

Protein sequence :
MLELLIGLVVAVFVGRYIIKGYSPTGVLMVGGLLLLIISAIMGHSILPEGTKSTGWNATDIVEYVKILLMSRGGDLGMMI
MMLCGFAAYMTHIGANDVVVKLASRPLQMINSPYILMVAAYILACLMSLAVSSATGLGVLLMATLFPIMVNVGISRGAAA
AICASPAAIILSPTSGDVVLAAQAANMPLVDFAFKVTLPISIAAIAAMAVAHFFWQRYLDKRDTSVLADAVDSNADDVIE
TNAPAFYAILPFTPIIGVLIFDGKWGPNLHIITILVICMLLTALIETVRNRNGKAVFAGLDVAYRGMADAFANVVMLLVA
AGVFAQGLSTVGFISSLIGLAQNFGSGSIVMMLVLVVITVLAAMTTGSGNASFYAFVELIPKLAAKMGINPEYLVIPMLQ
ASNLGRTISPVSGVIVAVAGMAKISPFEVVKRTSVPVLVGLIVVIVATEILVPVH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAQ07475.1 DcuC-like protein Not tested Not named Protein 5e-119 81