Gene Information

Name : Rahaq_0212 (Rahaq_0212)
Accession : YP_004210969.1
Strain : Rahnella sp. Y9602
Genome accession: NC_015061
Putative virulence/resistance : Resistance
Product : Cys/Met metabolism pyridoxal-phosphate-dependent protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 242681 - 243871 bp
Length : 1191 bp
Strand : -
Note : PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: tra:Trad_2517 Cys/Met metabolism pyridoxal-phosphate-dependent protein

DNA sequence :
ATGAAAAAACTGAACACTTCACGTTCTTTAGGGATGCGTACGCTCGCTGTTCATGGCGGACAGCAGCCCGATGCCCTGAC
CGGCGCGATTGCGACACCTATCACCGCCGCATCGGCATTTTCATACCCGGATTTTGACAGCGGCGCACGCCGTTTCAGTG
GTGAAGAACCGGGTTATATTTACAGCCGTTTCGCCAATCCGACGGTGGCCGTTTTTGAACAGAAACTGGCGGCGCTTGAA
GGCGCAGAAACCGCCGTTGCCTGCGCAAGTGGCATGGCAGCGATCAGCGCCACGTTGTTTGCCCTGCTGGTTCCCGGCGA
TGAAATCATTCATATCGGCACGCTGTATGGCGGCACTGAAGGCGTGGTGCGTAACCTGCTGCCACGTTATGGCATAAAAC
CGGTTCACGTTACCCATGTGAGCGAACTGGAAGCGGCATTCACAAAAAACACCAAAGTGGTGCTGGTGGAAACCCCGGCT
AACCCGGGACTGGATATCGCCGATCTGGCTGAAGTCGCCCGTCTGTCGAAAGCCGCCGGTGCAGTCAGTGTGGCGGATAA
TACCTTTGCCACACCGTACCTGACGCGCCCGCTGGAACTGGGAATTGATATCGTTCTGCATTCCGCGACCAAATACATCA
GCGGCCACGGCGATGCGACCGGTGGCGTAGTGGCCGGTTCGGCGGCATTAATCACGCCAATCCGCACCCTGAGTCTGAAG
CAGTTCGGCGGCAACCTGAGCCCGTTCGAAGCCAGTTTGCTGATCCGCGGCCTGAAAACTCTGCCGCTGCGCGTCGAAGC
CAGTTCGCTGAGCGCACAGGCGGTGGCGGAATTCCTCGACGGCCACAGCGCGGTAGACACCGTGTTCTATCCGGGGCTGA
AGCAGCATCCGGGACATGCCACCGCCTCAAAACAAATGAAACTGTTTGGCGGGATTATGGCCATTGAGCTGAAAGGCGGC
CTCAACGCCGCACGGACGTTCCTCGATAAGCTGAGCATCATCACGCAGGCGGTATCGCTCGGCGACACCGATTCGCTGGC
CTGCCATCCGGCATCGACAACGCACAGCGCCGTCGCGCCGGAAGTTCGCCGCCAGAGCGGTATCACCGACGGACTGGTGC
GCATCAGCATCGGTATCGAAGATACCGAAGACCTGATTGCTGATCTGCAACAGGCGCTGGAAGGGCTTTAA

Protein sequence :
MKKLNTSRSLGMRTLAVHGGQQPDALTGAIATPITAASAFSYPDFDSGARRFSGEEPGYIYSRFANPTVAVFEQKLAALE
GAETAVACASGMAAISATLFALLVPGDEIIHIGTLYGGTEGVVRNLLPRYGIKPVHVTHVSELEAAFTKNTKVVLVETPA
NPGLDIADLAEVARLSKAAGAVSVADNTFATPYLTRPLELGIDIVLHSATKYISGHGDATGGVVAGSAALITPIRTLSLK
QFGGNLSPFEASLLIRGLKTLPLRVEASSLSAQAVAEFLDGHSAVDTVFYPGLKQHPGHATASKQMKLFGGIMAIELKGG
LNAARTFLDKLSIITQAVSLGDTDSLACHPASTTHSAVAPEVRRQSGITDGLVRISIGIEDTEDLIADLQQALEGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-58 43
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-57 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rahaq_0212 YP_004210969.1 Cys/Met metabolism pyridoxal-phosphate-dependent protein BAC0207 Protein 1e-83 49