Gene Information

Name : Rahaq_2061 (Rahaq_2061)
Accession : YP_004212800.1
Strain : Rahnella sp. Y9602
Genome accession: NC_015061
Putative virulence/resistance : Virulence
Product : redoxin domain-containing protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : -
Position : 2237988 - 2238491 bp
Length : 504 bp
Strand : -
Note : PFAM: Redoxin domain protein; KEGG: ypb:YPTS_2338 thiol peroxidase

DNA sequence : 
ATGACCCAGACAGTACACTTTCAAAGCAACCCGGTTAGCGTTGCAGGCAAAATCCCTCAGAAAGGCGATGTTGCTAAGCC
TTTCACCCTGGTCGCTAAAGATCTTTCTGATGTCAGCCTGAGCAGCTTCGCGGGCAAACGTAAAGTCCTGAACATTTTCC
CAAGCATCGATACCGGCGTTTGCGCCACGTCCGTCCGCAAATTCAACCAACTGGCGGCTGACATCGACAACACTGTGGTG
CTGTGCATTTCTGCTGATCTGCCCTTCGCACAGTCCCGTTTCTGCGGCGCGGAAGGCCTGTCCAACGTGATTACCCTGTC
CACCCTGCGTGGCGGTGATTTCAAATCCGAATACGGCGTGGGCATTACCGATGGCGCATTGTCCGGTCTGACTGCCCGTG
CGGTTGTGGTGCTGGATGGTCAGGATAACGTGTTGTACAGCGAGCTGGTGAATGAAATCACCACTGAGCCTGACTATGAA
TCTGCGCTGGCTGTGCTGAAATAA

Protein sequence : 
MTQTVHFQSNPVSVAGKIPQKGDVAKPFTLVAKDLSDVSLSSFAGKRKVLNIFPSIDTGVCATSVRKFNQLAADIDNTVV
LCISADLPFAQSRFCGAEGLSNVITLSTLRGGDFKSEYGVGITDGALSGLTARAVVVLDGQDNVLYSELVNEITTEPDYE
SALAVLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 1e-33 50
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 7e-34 50
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 1e-33 50
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 5e-34 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rahaq_2061 YP_004212800.1 redoxin domain-containing protein VFG0087 Protein 2e-34 50