Gene Information

Name : Rahaq_0156 (Rahaq_0156)
Accession : YP_004210913.1
Strain : Rahnella sp. Y9602
Genome accession: NC_015061
Putative virulence/resistance : Virulence
Product : PTS system, mannitol-specific EIIC component
Function : -
COG functional category : S : Function unknown
COG ID : COG3037
EC number : -
Position : 175777 - 177042 bp
Length : 1266 bp
Strand : -
Note : KEGG: ebi:EbC_37840 PTS system, mannitol-specific EIIC component

DNA sequence :
ATGTCTTTCCTTCACTTTATTGTCAATGATGTATTAGGCCAGGCATCAATTTTAATCTCACTGATCGCCATGATTGGTCT
GATCGCATTAAAGAAAAGCACCGGCCAGATCATTACCGGTACATTAAAAACGCTGCTGGGTTTTCTGGTTCTGCTTTCCG
GGGCCAGCATTATTGTTAATGCCCTGACCTTTCTGGGTGAAATATTCCAGAAAGGGTTTCACATGCGCGGGATTGTTACC
GACGTCGGTTCTATTGCCGGTATCGCACAACAAACTCTCGGCCGTGAAACCGCATTAATTATGGTTCTGGCGTTTATCGT
TAATATCCTGATTGCCCGCCTGACCCGTTTCAAATATATCTTTCTCACCGGACAAGCATCGCTGTGGATGGCCACGGTGT
GTTCCGTTATCGGTTATATGGGCGGCTTGCGCGGCACGGAACTGATCCTGACTGGCGGCATTATTGCGGGCGTCATGGCC
GTCGGGATGCCGGTGCTGGCTCAGCCGATTGTGCGTAAAATCACCGGGTCCGATGATATTGCACTCGGCCATTTTTGCAC
CATCGGCTATATCGTGCAGGCAGGCGTGGCGAAAATCACCGGCGATGTCAGTAAAAGCACCGAAGATTTCGAACTGCCGC
AATCTTTCTCGTTCCTGCAGGACACCTACCTGTCGATGATGGTGGTGATGATCCCGATTTACCTGATCCCGGCGATTGCC
GCAGGCCCGGAAGTCGTCGCGCCTTACGCCAACAGCGTTAATTATCTGGTCTATTCGTTCCTGCAATCCATTCAGTTTGT
GGTCGGTGTTTACGTTCTGCTGTCGGGTGTGCGCCTGTTGCTGGCGGAAATCGTACCGGCATTTCGCGGCATCGCCCTGC
GCATCGTCCCGAATGCCATTCCGGCACTCGATTGTCCGGTGCTTTTCCCGTACGCACCGAACGCCGTCATTATCGGTTTC
ATCTCTACCACCATTGGCTCCATCATCGGTATGTTCCTGTTCCCGAGTCTCGGGCTGGCGATGATTTTACCGGGCATGCT
GACCAACTTCTTCGCGGGCGGCACGGCGGGAATCTTCGGCAATGCAGTCGGCGGACGACGCGGCGCGATTATCGGCGGTA
TCTTCCACGGCCTGTTTATCACCCTGCTGCCTGCGCTGTTGCTGCCGCTGCTGGGCAAGTTCGGCTTCTCGAACGTGACG
TTCAGTGACTCAGACGTGATCAGCGTCGGGCTGGTATTCGGCCATATTCTCAACTTCTTCCACTAA

Protein sequence :
MSFLHFIVNDVLGQASILISLIAMIGLIALKKSTGQIITGTLKTLLGFLVLLSGASIIVNALTFLGEIFQKGFHMRGIVT
DVGSIAGIAQQTLGRETALIMVLAFIVNILIARLTRFKYIFLTGQASLWMATVCSVIGYMGGLRGTELILTGGIIAGVMA
VGMPVLAQPIVRKITGSDDIALGHFCTIGYIVQAGVAKITGDVSKSTEDFELPQSFSFLQDTYLSMMVVMIPIYLIPAIA
AGPEVVAPYANSVNYLVYSFLQSIQFVVGVYVLLSGVRLLLAEIVPAFRGIALRIVPNAIPALDCPVLFPYAPNAVIIGF
ISTTIGSIIGMFLFPSLGLAMILPGMLTNFFAGGTAGIFGNAVGGRRGAIIGGIFHGLFITLLPALLLPLLGKFGFSNVT
FSDSDVISVGLVFGHILNFFH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF8 AAK27335.1 unknown Not tested PAI-I AL862 Protein 8e-66 46
unnamed CAC39291.1 hypothetical protein Not tested LPA Protein 7e-66 46
vpeC ADD91725.1 putative PTS system-specific IIC component VpeC Virulence PAI-I AL862 Protein 7e-66 46