Gene Information

Name : Rahaq_1519 (Rahaq_1519)
Accession : YP_004212268.1
Strain : Rahnella sp. Y9602
Genome accession: NC_015061
Putative virulence/resistance : Virulence
Product : 3-deoxy-D-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1212
EC number : 2.7.7.38
Position : 1658185 - 1658943 bp
Length : 759 bp
Strand : +
Note : TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; KEGG: ebi:EbC_15100 3-deoxy-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase

DNA sequence : 
ATGAGTTTTGTTGCTATTATCCCGGCCCGCTTCGGGTCAAGCCGTTTGCCGGGGAAGCCGTTGGCCGATATCAACGGTAA
ACCTATGGTTGTGCATGTGATGGAACGTGCACGGGAGTCGGGTGCTAAACGTGTAATTGTTGCGACAGACCATCCTGACG
TTGTGGCGGCGGTTGAAGCTGCGGGTGGTGAAGTTTGTCTTACCCGACCTGATCATCAGTCAGGCACTGAGCGTCTGGCA
GAAGTCATCGATTTATGTCAGTTTTCCGATGATGAAATTATCGTTAATGTTCAGGGCGACGAGCCGCTGATCCCGCCTGT
TATCATCCGTCAGGTGGCTGATAATCTGGCAAACAGTGAAGCAGGAATGGCAACACTGGCAGTGCCAATTGAAACAGCGG
AAGAAGCGTTTAACCCGAATGCGGTCAAAGTGGTTCGGGATGCCAAAGGTTACGCCATGTATTTTTCCCGCGCTACAATT
CCGTGGGAACGTGAACGTTTTGCCGTGTCGAAAGAAACGGTTGGTGATGTCTTCCTTCGTCACATCGGTATTTATGCATA
CCGTGCTGGTTTCATTCGCCAGTATGTGAAGTGGGAACCGACTAAACTTGAGCACATCGAATTACTCGAACAACTCCGGG
TGCTGTGGTACGGTGAAAAAATCCACGTTGATGTAGCGAAGGCCATTCCTTCTGTGGGTGTCGATACCGCTGAGGATCTG
GAACGTGTGCGCGTGATTTTGGGGCATAAAAATTCCTGA

Protein sequence : 
MSFVAIIPARFGSSRLPGKPLADINGKPMVVHVMERARESGAKRVIVATDHPDVVAAVEAAGGEVCLTRPDHQSGTERLA
EVIDLCQFSDDEIIVNVQGDEPLIPPVIIRQVADNLANSEAGMATLAVPIETAEEAFNPNAVKVVRDAKGYAMYFSRATI
PWERERFAVSKETVGDVFLRHIGIYAYRAGFIRQYVKWEPTKLEHIELLEQLRVLWYGEKIHVDVAKAIPSVGVDTAEDL
ERVRVILGHKNS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 1e-31 44
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 9e-32 44
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 5e-33 44