|
Name : Rahaq_1476 (Rahaq_1476) Accession : YP_004212225.1 Strain : Rahnella sp. Y9602 Genome accession: NC_015061 Putative virulence/resistance : Unknown Product : phage portal protein, PBSX family Function : - COG functional category : R : General function prediction only COG ID : COG5518 EC number : - Position : 1615911 - 1616942 bp Length : 1032 bp Strand : - Note : KEGG: yps:YPTB1764 capsid portal protein; TIGRFAM: phage portal protein, PBSX family; PFAM: portal protein DNA sequence : ATGAGTAAGCGCAAATTCCGCAAGGCAGCACAAAACACAGTCACCGCCACCACACAGCAGACCGGCGGCGCGGAGGCGTT CAGCTTTGGCGACCCGACGCCGGTGTTAGACCGCCGCGAAATCCTAGACTACATCGAATGCACGGGGAACGGCCAGTGGT ATGAGCCGCCGGTCAGCTTTGACGGGTTGGCTCGCACGCTGCGCGCAGCGGTTCATCACAGCTCATCGCTGTATGTGAAA CGTAATATTCTGGCTTCGACCTTTGTCCCGCACCCGTTGTTATCACAACAGGAGTTCAGCCGGTTCGCCCTGGATTACCT GGTATTCGGGAATGCGTTTTTAGAAGTGATCCGCAACCAGCTCGGCGATGCCGTGGTGATGAAAACCGTGCCTGCAAAAT ATGCACGGCGCGGCGTTGAGCCAGATACTTACTGGTTTGTGCAGCAATGGAAGGACGCGCACCAGTTCGAAGCAGGCAGC GTGTTTCATCTGATTGAGCCGGATATTAATCAGGAGTTGTACGGCCTGCCGGAATATCTCAGCGCCCTGAATTCAGCCTG GCTCAATGAGGCTGCCACGCTGTTCCGTCGTAAGTATTACCAGAACGGCGCGCACGCCGGATATATCCTGTATATGACCG ACGCGGCACAAAGCAGCTCTGATATCGATCAGATGCGTAAAGCGATGCGGGACACCAAAGGGCTGGGCAATTTCCGCAAC CTGTTCATGTACGCGCCGAACGGTAAGCCAGACGGGATAAAGATTTTGCCGCTGAGTGAAGTCGCGACGAAAGACGACTT CTTTAATATCAAGAAAGCCAGCCAGAACGATTTGCTGTGCGCGCACCGCGTTCCGCCGCAGATGATGGGGATCATTCCGG AGAACAGCGGCGGGTTTGGTGATTCGGTGAAGGCGTCTCAGGTGTTTGTCCGCAATGAACTGACACCGTTACAGGAGCGG TTTAAAGAGTTAAATGCGTGGTTTGGGGAGGAGCTGATCAGGTTTACTTCTTATGAGCTTACGCCGGAGTAG Protein sequence : MSKRKFRKAAQNTVTATTQQTGGAEAFSFGDPTPVLDRREILDYIECTGNGQWYEPPVSFDGLARTLRAAVHHSSSLYVK RNILASTFVPHPLLSQQEFSRFALDYLVFGNAFLEVIRNQLGDAVVMKTVPAKYARRGVEPDTYWFVQQWKDAHQFEAGS VFHLIEPDINQELYGLPEYLSALNSAWLNEAATLFRRKYYQNGAHAGYILYMTDAAQSSSDIDQMRKAMRDTKGLGNFRN LFMYAPNGKPDGIKILPLSEVATKDDFFNIKKASQNDLLCAHRVPPQMMGIIPENSGGFGDSVKASQVFVRNELTPLQER FKELNAWFGEELIRFTSYELTPE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4628 | NP_458710.1 | probable capsid portal protein | Not tested | SPI-7 | Protein | 1e-108 | 68 |
| t4321 | NP_807917.1 | capsid portal protein | Not tested | SPI-7 | Protein | 1e-108 | 68 |
| unnamed | ABR13463.1 | predicted capsid packaging protein | Not tested | PAGI-6 | Protein | 3e-84 | 55 |
