Gene Information

Name : Rahaq_1406 (Rahaq_1406)
Accession : YP_004212156.1
Strain : Rahnella sp. Y9602
Genome accession: NC_015061
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : R : General function prediction only
COG ID : COG1123
EC number : -
Position : 1535296 - 1537164 bp
Length : 1869 bp
Strand : +
Note : KEGG: ebi:EbC_14460 ABC transporter ATP-binding protein; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase

DNA sequence :
ATGAACAGCCCGATGAACGGTCCTCTTATTCTGCCGCCCGAACACGTGCTTGCCGTCAGCCAGCTTAGCGTGCAGTTTGC
CCATGAAAGGCAGGTCATTCAGGCGGTCAGTCATCTCAGTTTTCAGGTAAAACGCGGTGAAACGCTGGCGATTGTTGGCG
AATCGGGTTCCGGAAAATCAGTGACCTCACTGGCGCTGATGCGGCTGGTGGAACAGGGCGGCGGGAAGATTTCACAAGGT
GAAATGCAGTTGCGCCGCCGTAACGGTGAGATAGTCGATCTGATGAATGCCACGCAGCCCGCCATGCGTAACCTGCGCGG
CGCGGATATGGCGATGATTTTTCAGGAGCCGATGACGTCGCTCAATCCGGTCTTCCCGGTGGGGGAGCAAATCGCCGAAT
CGATCCGCTTGCACCAAAATAAAGATCACCGGGCAGCCCGTGCGGAAGCATTACGGATGCTGGATCTGGTGCGTATTCCC
GAAGCCAGAAATATTCTCGACAGTTACCCGCATCAGCTTTCCGGCGGTATGCGCCAGCGGGTGATGATTGCGATGGCACT
CTCCTGTAAACCTGCGTTGCTGATTGCCGACGAACCGACCACGGCGCTGGATGTCACCATTCAGGCGCAAATTCTGCAAC
TGATCCGGGTGCTGCAAAAAGAGATGCAGATGGGGGTGATTTTTATCACGCATGACATGGGGGTGGTGGCCGAAATTGCT
GATCGTGTGCTGGTGATGCATCAGGGCAACAGTGTGGAAACGGGGGAAGTGAACGCGATATTCCGTTCTCCGCAGGCGCC
TTATACCCAGACGTTGCTGGCGGCGGTGCCAAAACTCGGTTCGATGGCGGGTAAACCGCTGCCCGCACGCTTCCCGGCAC
CCACACAACAGGAAAGCGATCCGGAACTGATTCAAAACACCCTGACGCCAGGCGTGCCCCCGATATTACAGGTGCGTGAT
CTGGTTACGCGGTTCGACCTGCGCAGCGGCATTTTCAATCGCGTGACCCGCCGGGTTCATGCCGTGGAAAAAGTCAGTTT
TGATTTGCATCCCGGTGAAACGCTGGCGCTGGTGGGGGAGTCAGGCTGTGGTAAATCCACCACCGGCCGTTCGCTGCTAA
AACTAGTGAAGAGTCAGGGGGGCACCATCACCTTTAACGGCCAGACGCTGACTGATATCGGCGGCAGTGAACTGCAACAT
CTGCGCCGTGATATCCAGTTTATTTTTCAGGATCCCTACGCCTCGCTCGATCCGCGCCTGACGGTAGGATATTCCATTAT
GGAACCGCTGCTGGTTCACAATCTGGCAAAAGGCGCAGAAGCCGAAGCCCGTGTGGCGTGGTTGCTGGAAAAAGTCGGAC
TGCTGCCGGAACACGCGCAGCGCTATCCTCATGAGTTTTCCGGCGGCCAGCGGCAGCGAATTTGCATTGCGCGTGCGCTG
GCCCTTAATCCAAAAGTGGTGATTGCCGATGAATCGGTTTCGGCGCTGGATGTGTCTATCCGCGCGCAAATCATCAATCT
GCTGATGGATTTGCAGAAAGAGTTTGGTCTGGCATTTTTGTTTATTTCTCACGATATGGCCGTTGTTGAACGCATCAGCC
ACCGCGTGGCGGTGATGTATCTCGGGCAGATAGTGGAAATCGGCTCGCGCCGTGCGGTATTTGAAACACCGCAACATGCG
TATACCCGCAAACTGATGGCGGCTGTACCGGTCGCCGATCCGGCGCACAAGCGAAAAGACCAGGCGCTGCTGGTGGATGA
AATCCCCAGCCCGATCCGCGGGCTGCACGATGACCCGGTGGTGATGCCATTGGTGAAGGTGGGCGAAGGCCATTTCGTCG
CCAGACATACGATTGCGGGTATTTACTGA

Protein sequence :
MNSPMNGPLILPPEHVLAVSQLSVQFAHERQVIQAVSHLSFQVKRGETLAIVGESGSGKSVTSLALMRLVEQGGGKISQG
EMQLRRRNGEIVDLMNATQPAMRNLRGADMAMIFQEPMTSLNPVFPVGEQIAESIRLHQNKDHRAARAEALRMLDLVRIP
EARNILDSYPHQLSGGMRQRVMIAMALSCKPALLIADEPTTALDVTIQAQILQLIRVLQKEMQMGVIFITHDMGVVAEIA
DRVLVMHQGNSVETGEVNAIFRSPQAPYTQTLLAAVPKLGSMAGKPLPARFPAPTQQESDPELIQNTLTPGVPPILQVRD
LVTRFDLRSGIFNRVTRRVHAVEKVSFDLHPGETLALVGESGCGKSTTGRSLLKLVKSQGGTITFNGQTLTDIGGSELQH
LRRDIQFIFQDPYASLDPRLTVGYSIMEPLLVHNLAKGAEAEARVAWLLEKVGLLPEHAQRYPHEFSGGQRQRICIARAL
ALNPKVVIADESVSALDVSIRAQIINLLMDLQKEFGLAFLFISHDMAVVERISHRVAVMYLGQIVEIGSRRAVFETPQHA
YTRKLMAAVPVADPAHKRKDQALLVDEIPSPIRGLHDDPVVMPLVKVGEGHFVARHTIAGIY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 5e-100 41