Gene Information

Name : Rahaq_1367 (Rahaq_1367)
Accession : YP_004212117.1
Strain : Rahnella sp. Y9602
Genome accession: NC_015061
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1134
EC number : -
Position : 1494135 - 1494800 bp
Length : 666 bp
Strand : -
Note : KEGG: ecc:c3697 KpsT protein; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGATAAAAATCGAAAACCTGACAAAATCCTACCGCACACCGAAAGGCCGCCATTACGTTTTTAAAGATCTCAATGTTGA
GCTGCCTTCAGGTAAAAGCGTGGCGTTGATTGGCCGCAATGGCGCGGGTAAATCAACGTTGTTACGCGTCATCGGCGGCA
TTGACCGCCCGGATTCCGGCAAAATTCACACGGAGAAAACCATTTCCTGGCCGGTTGGCCTGGCCGGCGGATTTCAGGGA
AGCCTGACCGGACGTGAAAATGTAAAATTCGTCGCCCGCCTCTATTCCACACCAGATCAGTTACGTGAAAAAGTCGCCTT
TGTCGAAGAGTTTGCCGAACTGGGCAAATACTTTGATATGCCGATTAAAACCTATTCTTCCGGTATGAAATCCCGTCTGG
GTTTTGGCCTGAGCATGGCATTTAAATTTGATTATTATCTTGTCGATGAAGTCACCGCAGTCGGCGATGCCAGATTTAAA
CAAAAATGCGCAGACTTATTCAAAGCACGACATGAGGAAGCCAGCTTTCTGATGGTTTCACATAGCCTCGGATCACTGAA
AGAGTTTTGCGATGTGGCTTTGTTTATTGGAAGGGATAACAAAGTGAAGTACTTCGAATCGGTTGATGAAGCTATTACCA
CTTATAAAAATGATGAAGGGATATGA

Protein sequence : 
MIKIENLTKSYRTPKGRHYVFKDLNVELPSGKSVALIGRNGAGKSTLLRVIGGIDRPDSGKIHTEKTISWPVGLAGGFQG
SLTGRENVKFVARLYSTPDQLREKVAFVEEFAELGKYFDMPIKTYSSGMKSRLGFGLSMAFKFDYYLVDEVTAVGDARFK
QKCADLFKARHEEASFLMVSHSLGSLKEFCDVALFIGRDNKVKYFESVDEAITTYKNDEGI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 3e-80 75
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 2e-78 73
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 3e-45 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rahaq_1367 YP_004212117.1 ABC transporter VFG1449 Protein 8e-79 73
Rahaq_1367 YP_004212117.1 ABC transporter VFG0696 Protein 8e-47 45
Rahaq_1367 YP_004212117.1 ABC transporter VFG0258 Protein 1e-45 45
Rahaq_1367 YP_004212117.1 ABC transporter VFG2563 Protein 3e-44 43